Trichomonas vaginalis: 4761158
Help
Entry
4761158 CDS
T01022
Symbol
TVAGG3_0827470
Name
(RefSeq) ATP-dependent RNA helicase DBP3 family
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tva
Trichomonas vaginalis
Pathway
tva03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4761158 (TVAGG3_0827470)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tva03041
]
4761158 (TVAGG3_0827470)
03009 Ribosome biogenesis [BR:
tva03009
]
4761158 (TVAGG3_0827470)
Enzymes [BR:
tva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
4761158 (TVAGG3_0827470)
Spliceosome [BR:
tva03041
]
Complex A
U1 snRNP components
U1 related factors
4761158 (TVAGG3_0827470)
Complex B
4761158 (TVAGG3_0827470)
Ribosome biogenesis [BR:
tva03009
]
Eukaryotic type
Pre-60S particles
Helicases
4761158 (TVAGG3_0827470)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
DUF5854
Motif
Other DBs
NCBI-GeneID:
4761158
NCBI-ProteinID:
XP_001315537
UniProt:
A2EVI2
LinkDB
All DBs
Position
VI:complement(8200046..8201994)
Genome browser
AA seq
598 aa
AA seq
DB search
MSNNWNNSGEYKNRFDSGGEDNDDGRRYGSGGGRGMSHSRSFAYERRGGRDEGRFGYRDG
PRFGRGRGGRGRHDRSPSPPTRTAECVPVKLNQDFTPSSTKDEQVQFLKSNAIKLLASDV
PSPALTFEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKGHDLIGIAKTGSGKTAAFL
IPAMVHIGLQEPMYRGDGPIVLVLSPTRELAQQIAEVAKGFCDNLMIRQTCLFGGAGRGP
QANDLRHLPSLVVATPGRLIDFIEGGQCPMNRVNFLVLDEADQMLDMGFEPQIRKIIGHI
SKDRQTMMFSATWPKEIQQLAADFLVDPVHMIIGNKDLTTNSNIKQVITKCEEFEKLSKC
LEVLNEHKDDKIIIFTKTKRTTDDLQENLNMKGFQAYSLHGDKAQNQRDFVLGKFRSCKK
GILVATDVAARGLDVNDIDIVINYDFPGDIETYVHRIGRTARGNKEGLAVTFFTDENKNM
SRKLAKIMTQAKQELPDWLKALADVTPKGAWKEGYGSRFAGRGGYGRGGYGGYGRGGGGY
GGDRGGYGGDRGNFGDRRGGYGGGQGGYGGNQGGYGGGYGNRGGFGGDRAGYNGPRNY
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaactggaacaattccggagagtataagaatcgtttcgatagcggaggtgaa
gacaatgacgatggtcgtcgttatggcagtggtggtggccgcggcatgtctcattcacgc
tcatttgcttatgaacgccgtggcggacgcgatgaaggccgctttggctatcgtgatgga
cctagatttggtcgtgggcgtggcggacgtggtcgtcacgatcgttctccttctccacca
acaagaactgctgaatgcgtcccagttaaactcaaccaagactttactccatcatcaaca
aaggacgaacaagttcaatttctcaaatctaacgcaattaagttactcgcttctgatgtt
ccttctccagctttaactttcgaagaacttaatcttccagacacaattacaaagacaatt
acagacaacaagtgggaaaagccaaccccaattcaatctgtctcaattcctgtcgcatta
aaaggacatgatcttattggtattgctaagacaggttccggcaagacagcagctttcctc
atccctgccatggtccacattggtctccaggagccaatgtaccgtggagatggtccaatt
gttcttgttctctctccaacaagagaacttgctcaacagattgcagaagttgccaaggga
ttctgcgacaacctcatgatcagacagacatgtcttttcggaggtgctggacgtggtcca
caggcaaatgaccttcgtcaccttccttctctcgttgttgctacgccaggtcgtttaatc
gacttcattgaaggtggccagtgcccgatgaaccgtgtaaacttccttgtcctcgatgaa
gctgatcaaatgcttgatatgggctttgagccacagatcaggaagattattggtcatatc
agcaaggaccgtcagacaatgatgttctctgccacatggccaaaggaaattcagcaactc
gccgctgatttccttgtagatccagttcacatgatcattggcaacaaagatctcacgaca
aacagcaacatcaagcaggtcattaccaaatgcgaggagttcgagaagctctccaaatgc
ttagaagtacttaatgaacacaaagacgacaaaatcatcattttcacaaagacaaagcgt
actacagacgatttacaagagaacctcaacatgaagggattccaagcttactcccttcat
ggcgacaaagcgcagaaccagagagatttcgttcttggcaaattcagatcatgcaagaaa
ggaatcctcgtggctacagatgtcgctgcaagaggtctcgatgttaacgatatcgatatt
gttattaactacgatttcccaggtgatatcgaaacatacgttcacagaattggccgtaca
gcaagaggtaacaaggaaggcctcgcagttactttctttacagacgaaaacaagaacatg
tccagaaaactcgcaaagattatgacacaggccaaacaagaacttcctgactggctaaag
gcactcgcagacgttactccaaagggtgcttggaaggaaggttacggttctagattcgct
ggacgcggtggctacggccgtggcggctacggaggttatggccgtggtggcggcggttac
ggtggtgaccgcggtggctacggcggagaccgtggaaacttcggagatagaagaggcgga
tacggtggcggccaaggcggatacggaggcaaccagggtggctacggtggtggatatgga
aaccgtggcggattcggtggtgatagagctggatataatggaccacgcaactattaa
DBGET
integrated database retrieval system
