Trichomonas vaginalis: 4762266
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Entry
4762266 CDS
T01022
Symbol
TVAGG3_0277920
Name
(RefSeq) RNA-binding protein family
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
tva
Trichomonas vaginalis
Pathway
tva03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4762266 (TVAGG3_0277920)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tva03041
]
4762266 (TVAGG3_0277920)
Spliceosome [BR:
tva03041
]
Complex A
U2 snRNP components
U2 related factors
4762266 (TVAGG3_0277920)
Complex B
4762266 (TVAGG3_0277920)
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Motif
Pfam:
RRM_1
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
4762266
NCBI-ProteinID:
XP_001316628
UniProt:
A2ESG1
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All DBs
Position
V:<4523975..>4525394
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AA seq
379 aa
AA seq
DB search
MQEKELNIRKIPRLKGGWNVSPEEYKAMGYTPGLPPGLVAPTSKSIREISSLFEICGTKN
QYIQSNEEKLYMENTIFVENRPEDADPLQTVQFIVKQLMKQGSYSSPGTIPDFYSYQNQV
RVVIIFPSKTDAETVMKLDQQLVFNGTKLHFTRPEDYHQIPRANPSFLFAEHPQRVIIVN
VDTSQLHQLPEFLQHFFDFDAIYPVDNMNDCVLVDVRPPMSPEVASSRINGKQFGDYVLS
CSAMRSVYDQEIPDYPGLFNIPCEGLSLQQILQPKTRITCGAETSEKCGKFLYIMNCVPF
EVIDNRNLNVMVSYDIANELGKYGKVVKCTLSKDPNIGSIRNFGVAVVEFETEEDALEAQ
ISVAGMKYMGRTVITMLSE
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaaagaattgaacattaggaaaattccgaggttgaaaggcggttggaatgta
agtccagaggaatacaaagctatgggatatacacctggccttcctcctggcctcgttgca
ccaactagcaaatctattagagaaatttcgagtctttttgaaatatgtggaacaaaaaat
caatacattcaatctaatgaagagaaattatatatggaaaatacaatattcgttgaaaat
aggccagaagatgctgatcctctacaaacagtacaatttattgtaaaacaacttatgaaa
caaggatcctattcttctccaggaactattcctgacttttactcataccaaaatcaagtt
cgcgtcgtaattatttttccatccaaaacagatgcggaaactgttatgaaactcgatcag
caattagtttttaatggcacaaaattacattttactaggccagaagactaccatcaaatt
ccaagagcaaatccatcatttttattcgccgaacatccacagagagttattattgttaac
gttgatacatcccaattacatcaattacctgaattccttcaacatttctttgattttgat
gcgatttaccctgttgataatatgaatgactgtgttttagtcgatgtgaggccaccgatg
tccccagaagttgcttcatctaggattaacgggaaacagttcggagattacgttttatca
tgttctgcgatgagatctgtttatgaccaagaaattcctgattatccaggtttgtttaat
attccatgcgaaggattatcacttcaacagatattgcagccaaaaacgaggattacttgt
ggtgcagaaacttccgaaaaatgcggaaaattcttgtatataatgaattgtgttcctttt
gaagtaattgataacaggaatttaaatgttatggtatcatatgacattgctaatgaactt
ggaaagtatggaaaggttgtaaagtgtactttatcaaaggatccaaatattggatcaata
agaaattttggagttgctgttgttgagtttgaaacggaagaagacgctttagaagcacaa
atatctgttgcaggaatgaaatacatgggaagaacagttataacaatgttatctgaatga
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