Trichomonas vaginalis: 4763806
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Entry
4763806 CDS
T01022
Symbol
TVAGG3_0334540
Name
(RefSeq) negative stranded viral RNA replication
KO
K17890
autophagy-related protein 16-1
Organism
tva
Trichomonas vaginalis
Pathway
tva04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
4763806 (TVAGG3_0334540)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tva04131
]
4763806 (TVAGG3_0334540)
03029 Mitochondrial biogenesis [BR:
tva03029
]
4763806 (TVAGG3_0334540)
Membrane trafficking [BR:
tva04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
4763806 (TVAGG3_0334540)
Others
Specific organelles associated proteins
Auto phagosome
4763806 (TVAGG3_0334540)
Mitochondrial biogenesis [BR:
tva03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
4763806 (TVAGG3_0334540)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_SCAP
Tropomyosin
CARD
Baculo_PEP_C
Beta-prop_DCAF4
SUS_EPBD
WDR90_beta-prop_4th
SpoIVA_middle
DUF4763
Myosin_tail_1
APG6_N
zf-C4H2
ATG16
Motif
Other DBs
NCBI-GeneID:
4763806
NCBI-ProteinID:
XP_001318158
UniProt:
A2EN27
LinkDB
All DBs
Position
V:14198567..14200111
Genome browser
AA seq
514 aa
AA seq
DB search
MDDLISRLRQRDEISKTDQSFNELCQTSNEILFELLELKDKTRFEDKLKQEIVPYQEAED
VNALKADIKRLSKEHKDTVKKLKDIESQIKELIDFVEIKSTEISSLLLKNSKLQKEYDEL
QENLNSANAILSNLSNSIVYKIKTKDSLITQLYDYENTLQKCKNSMQSINNRIELLKKKS
YSSLLVRSFQIPNQSNDFPANLKSHRSKKRKTYDIYNYMSSSTDQCTNKFNFTNQIYSID
FSPSNPYAAIGGADRCVHIIRLDKMEISANYYTAKNGIMAVNYSPTGSKLLSASFDHNIS
IYEGTGSSMLFSTSLHQDAINDAIFTSDYALCSAGRDCMIYNFDINKKATKASLRCQSTP
QSLNLQMEGNLLLCGHRDGKLRYWDMFSDKCAIEIQACRSEIVQVLSNEPENLVFTISRA
KNISSFDKRMPERKLIQQTIPNLMIYDHLQAAVYKNNIYIGGQNKTLKILDQNTLKETKP
FNSDHEADICAVSVHPILGTIITGDVSGGVCVWS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttgatttctcgtttacgtcaacgagatgagatatctaaaaccgatcaaagc
tttaacgagttgtgtcaaacctcaaacgagattttgttcgaattacttgaattaaaggat
aaaacgcgttttgaagataaattaaagcaagaaattgttccatatcaagaagcagaggac
gttaatgcactaaaggctgatattaaaaggctttctaaagagcataaagatacagttaaa
aaattgaaagatatagaatcccaaattaaagaactaattgattttgttgaaatcaaatca
acagagatatcttctttattgctaaagaatagtaaacttcagaaagaatacgatgaattg
caagaaaatctgaattctgcaaatgcaattttatcaaatttatcgaattctattgtttac
aagataaaaaccaaagattcattgataacacagctctatgattatgaaaatacactacaa
aaatgtaaaaattcaatgcaaagtataaataatagaatcgaacttcttaaaaagaagtca
tattcttctttactagtacggagcttccaaattccaaatcaaagtaatgattttccagca
aatcttaaatctcatcgatccaaaaagcgaaagacatatgatatttataattatatgtca
tcatcaacagatcaatgtaccaacaagttcaattttacaaatcaaatttattccattgat
ttttcaccttcaaatccatatgctgccattggtggtgctgacaggtgcgtccatattata
cgtcttgataaaatggaaatatcagcaaattactataccgccaaaaacggaattatggca
gtcaattattctccaacaggaagtaagttactttcagcgtcattcgaccacaatatatcc
atatatgaaggtacaggatcgtcaatgctcttttctacgtctttgcatcaagatgcaatt
aatgacgcaatttttacatcagattatgctctttgctcagctggaagagactgtatgatc
tataactttgatattaacaaaaaggctacaaaagcttctcttagatgccaaagtactcct
caatctttgaatcttcagatggaaggcaatcttttactttgcggacatagagacgggaag
cttagatactgggatatgttcagcgataagtgtgccatagaaattcaagcttgtcgttct
gaaattgtacaagtattgagcaatgaaccagaaaacctggtatttactattagcagagca
aagaatatctcgagctttgataaaagaatgcctgagagaaaattaattcagcaaacaatt
ccaaatctgatgatatatgatcatttacaagcagctgtatataagaataatatttatatc
ggtggtcagaacaaaacattaaagattcttgatcaaaatacactcaaagaaacaaaacct
ttcaattctgatcacgaggcagatatttgtgcagtatctgtccatccaatcttaggaaca
atcataacaggagatgtttccggcggagtatgcgtgtggagctaa
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