Trichomonas vaginalis: 4765956
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Entry
4765956 CDS
T01022
Symbol
TVAGG3_0077890
Name
(RefSeq) spliceosomal snRNP assembly
KO
K11098
small nuclear ribonucleoprotein F
Organism
tva
Trichomonas vaginalis
Pathway
tva03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4765956 (TVAGG3_0077890)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
4765956 (TVAGG3_0077890)
03041 Spliceosome [BR:
tva03041
]
4765956 (TVAGG3_0077890)
03032 DNA replication proteins [BR:
tva03032
]
4765956 (TVAGG3_0077890)
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
4765956 (TVAGG3_0077890)
Spliceosome [BR:
tva03041
]
Complex A
U1 snRNP components
Sm proteins
4765956 (TVAGG3_0077890)
U2 snRNP components
4765956 (TVAGG3_0077890)
Complex B
U1 snRNP components
4765956 (TVAGG3_0077890)
U4/U6.U5 tri-snRNP components
4765956 (TVAGG3_0077890)
Complex C
U2 snRNP components
4765956 (TVAGG3_0077890)
DNA replication proteins [BR:
tva03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
4765956 (TVAGG3_0077890)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SPC22
Motif
Other DBs
NCBI-GeneID:
4765956
NCBI-ProteinID:
XP_001320283
UniProt:
A2EH12
LinkDB
All DBs
Position
IV:<12428465..>12429031
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AA seq
98 aa
AA seq
DB search
MSETTKYFPQKFMESLLNKQIVIKLKWENIEYVGTLISFDERMNIHLSETSEYVGGKTEG
VMGDVIIRCNNILHIREKPEVYPPPVQAPQLEFDEEAQ
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaactaccaaatattttcctcaaaagtttatggaatctctgctgaacaagcag
atagttatcaaacttaaatgggaaaacattgaatatgtcggcacgttgatttcgtttgat
gaaagaatgaatatccatctatccgaaacttctgaatatgttggaggaaaaacagaaggc
gtcatgggcgatgttattattcgctgtaataatattcttcacattcgtgaaaaaccagaa
gtttatcctcctcctgttcaggcacctcaattagaattcgacgaagaagctcaataa
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