Trichomonas vaginalis: 4766021
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Entry
4766021 CDS
T01022
Symbol
TVAGG3_0173220
Name
(RefSeq) pre-mRNA 3'-splice site binding
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
tva
Trichomonas vaginalis
Pathway
tva03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4766021 (TVAGG3_0173220)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tva03041
]
4766021 (TVAGG3_0173220)
Spliceosome [BR:
tva03041
]
Complex A
U2 snRNP components
U2 related factors
4766021 (TVAGG3_0173220)
Complex B
4766021 (TVAGG3_0173220)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
RRM_1
Torus
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
4766021
NCBI-ProteinID:
XP_001320349
UniProt:
A2EGN8
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All DBs
Position
IV:complement(26555373..26556947)
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AA seq
339 aa
AA seq
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MHGEICSRMHIKPQVSNTLLLANFYQNPYHFMSLLPPDTLIIENETIRNNFDEFYLDVYE
ELRTFGPISEFVVSGNLCEHLLGNVLVMYENLENALTAYNNLRGRYYGGRPIDVQFSPVV
NFNVAVCRQFKEGKCPHNEKCNFIHPIIPSDNILELCPVSHVMGHSSLSLEDLQPIQNTN
TRSRDRDRDRDRERDRDRDNYRERDRNRYRDFERENERDPYQRNRNYNYDRNPRYSDQVP
PRRYQENVIRDYPPPESTAYRPDLLLPGQGIYEYPQPDEYQPNRRRYPSPEQAAPPPYYN
RYNPDRGYDRNPDRNDYYRNPNRNYNDRGYNRGPRRDSY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcatggagaaatctgttcaaggatgcacatcaagccacaagtttcaaatacattactt
ttagcaaatttctaccaaaatccatatcattttatgtcattacttccaccagacacatta
ataatcgaaaatgaaacaattcgcaataattttgatgaattttaccttgatgtttacgaa
gaacttcgaacatttggtcctatttcagaatttgttgtatcaggtaatctctgcgagcat
ttactcggaaatgttttagttatgtatgaaaatttagaaaacgcacttacagcttacaat
aatttacgaggaaggtactatggcggccgcccgattgatgttcagttttctcctgttgtc
aactttaatgttgctgtttgccgccagtttaaagaaggtaaatgtcctcataatgaaaaa
tgcaattttatacatccgataataccttcagacaacattctagagttgtgtccagtttca
catgttatgggacacagttctttgtctttagaagatttacaaccaatccaaaatacaaac
acaagaagtcgcgatagagacagagacagggatagagaacgtgatagagatagagacaat
tacagagaaagagatcgcaatagatatcgtgattttgaaagagaaaatgaaagggatcca
taccaaagaaacagaaattataattacgatagaaatccaagatacagtgatcaagttcct
ccacgaagataccaagaaaacgtgataagagactatccaccacctgaatctactgcttat
cgaccagatttactacttcctggccaaggaatatacgagtatccgcaacctgacgagtat
caaccaaatagaagaagatatccatctccagaacaagctgctccacctccatattataat
cgttacaatccggacagaggttatgacagaaatcctgatagaaatgattattacaggaat
ccaaatagaaattataatgatagaggttataatcgtggcccaagacgtgattcctactaa
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