KEGG   Trichomonas vaginalis: 4766021
Entry
4766021           CDS       T01022                                 
Symbol
TVAGG3_0173220
Name
(RefSeq) pre-mRNA 3'-splice site binding
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
tva  Trichomonas vaginalis
Pathway
tva03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tva00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4766021 (TVAGG3_0173220)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tva03041]
    4766021 (TVAGG3_0173220)
Spliceosome [BR:tva03041]
 Complex A
  U2 snRNP components
   U2 related factors
    4766021 (TVAGG3_0173220)
 Complex B
    4766021 (TVAGG3_0173220)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_2 RRM_1 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 4766021
NCBI-ProteinID: XP_001320349
UniProt: A2EGN8
LinkDB
Position
IV:complement(26555373..26556947)
AA seq 339 aa
MHGEICSRMHIKPQVSNTLLLANFYQNPYHFMSLLPPDTLIIENETIRNNFDEFYLDVYE
ELRTFGPISEFVVSGNLCEHLLGNVLVMYENLENALTAYNNLRGRYYGGRPIDVQFSPVV
NFNVAVCRQFKEGKCPHNEKCNFIHPIIPSDNILELCPVSHVMGHSSLSLEDLQPIQNTN
TRSRDRDRDRDRERDRDRDNYRERDRNRYRDFERENERDPYQRNRNYNYDRNPRYSDQVP
PRRYQENVIRDYPPPESTAYRPDLLLPGQGIYEYPQPDEYQPNRRRYPSPEQAAPPPYYN
RYNPDRGYDRNPDRNDYYRNPNRNYNDRGYNRGPRRDSY
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgcatggagaaatctgttcaaggatgcacatcaagccacaagtttcaaatacattactt
ttagcaaatttctaccaaaatccatatcattttatgtcattacttccaccagacacatta
ataatcgaaaatgaaacaattcgcaataattttgatgaattttaccttgatgtttacgaa
gaacttcgaacatttggtcctatttcagaatttgttgtatcaggtaatctctgcgagcat
ttactcggaaatgttttagttatgtatgaaaatttagaaaacgcacttacagcttacaat
aatttacgaggaaggtactatggcggccgcccgattgatgttcagttttctcctgttgtc
aactttaatgttgctgtttgccgccagtttaaagaaggtaaatgtcctcataatgaaaaa
tgcaattttatacatccgataataccttcagacaacattctagagttgtgtccagtttca
catgttatgggacacagttctttgtctttagaagatttacaaccaatccaaaatacaaac
acaagaagtcgcgatagagacagagacagggatagagaacgtgatagagatagagacaat
tacagagaaagagatcgcaatagatatcgtgattttgaaagagaaaatgaaagggatcca
taccaaagaaacagaaattataattacgatagaaatccaagatacagtgatcaagttcct
ccacgaagataccaagaaaacgtgataagagactatccaccacctgaatctactgcttat
cgaccagatttactacttcctggccaaggaatatacgagtatccgcaacctgacgagtat
caaccaaatagaagaagatatccatctccagaacaagctgctccacctccatattataat
cgttacaatccggacagaggttatgacagaaatcctgatagaaatgattattacaggaat
ccaaatagaaattataatgatagaggttataatcgtggcccaagacgtgattcctactaa

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