Trichomonas vaginalis: 4766540
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Entry
4766540 CDS
T01022
Symbol
TVAGG3_0089940
Name
(RefSeq) transcription-dependent tethering of RNA polymerase II gene DNA protein
KO
K14298
mRNA export factor
Organism
tva
Trichomonas vaginalis
Pathway
tva03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
4766540 (TVAGG3_0089940)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
4766540 (TVAGG3_0089940)
03036 Chromosome and associated proteins [BR:
tva03036
]
4766540 (TVAGG3_0089940)
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
4766540 (TVAGG3_0089940)
Chromosome and associated proteins [BR:
tva03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
4766540 (TVAGG3_0089940)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR3_2nd
WD40
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_ACSF4
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_DCAF12
Beta-prop_RIG_2nd
Beta-prop_RSE1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Pep3_Vps18
Mcl1_mid
Beta-prop_WDR19_2nd
Tautomerase-like
Motif
Other DBs
NCBI-GeneID:
4766540
NCBI-ProteinID:
XP_001320859
UniProt:
A2EFD9
LinkDB
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Position
IV:14272313..14273400
Genome browser
AA seq
330 aa
AA seq
DB search
MIAHAATGAPSQATFAVADVNPKDTVSCMQAIDAKGRKLLAAGSWDGSLNVYEVNEIKAT
NIVSHAESNVAIMRLCFNETGEIIYFATSSGEIRSLTISSKQVVPLGNHKERVVGIGYYA
AQKVVVACSADGCLQIWNATSKQSKKEIKIQGKPTAMASYENSVFVATDKQKIFKVDLNK
PDTQEHIDSKEKRQGLYTCLAINPQPGNIQVLAGSTYGAVEMIVGHNSKIFEAHRNGNQA
FAVNAVAITQRGFGISGGTDGKLCFYVFNSVAKTNNNIDLGKDVHVTALASIADGIVAYA
VGNDWSKGAMDKTQQETQIIIRKYAAKEIM
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgattgcgcatgctgccactggtgcgccatcacaagccacttttgctgtagctgatgtt
aatccaaaagatacagtctcatgcatgcaagctatagatgcaaaaggaaggaaacttctc
gcggctggttcttgggatggctctcttaacgtttatgaagttaatgaaatcaaagccaca
aatatagtttctcatgcagagtcaaacgttgctattatgcgtctttgctttaatgaaacg
ggcgaaattatatattttgcgacatcgagtggtgaaatcaggtcattgacaatatcttca
aagcaagtagtccctcttggcaatcataaagagcgtgttgtcggaattggctattacgcg
gcccaaaaagttgttgttgcttgttctgctgatggctgtcttcaaatttggaatgccaca
tcaaaacaatctaagaaggaaattaagatacaaggcaagccaacagctatggcttcttat
gaaaattcagttttcgttgctacagacaaacaaaagattttcaaggtagatcttaacaaa
cccgatactcaagagcacatagattccaaagaaaagaggcaaggattatacacatgcttg
gctattaatcctcagccaggaaacattcaagttctcgcaggttctacatacggagctgtt
gaaatgatcgttggacataatagtaagatatttgaagcccacagaaatggaaatcaagcc
tttgctgtaaatgctgttgcaattacacagagaggattcggaatttctggtggtacagac
ggaaaattatgtttctacgtatttaacagtgttgcaaaaactaataataacattgatctc
ggaaaagacgttcatgttacagcattagcttcaattgcagatggaattgttgcttatgct
gttggtaatgattggtcaaagggcgctatggataaaactcagcaagaaacgcaaattatt
ataagaaaatacgctgccaaagagatcatgtaa
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