Trichomonas vaginalis: 4767069
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Entry
4767069 CDS
T01022
Symbol
TVAGG3_0948710
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2 family
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
tva
Trichomonas vaginalis
Pathway
tva03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
4767069 (TVAGG3_0948710)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
4767069 (TVAGG3_0948710)
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
4767069 (TVAGG3_0948710)
U7-dependent histone pre-mRNA processing factors
4767069 (TVAGG3_0948710)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
Anti-Pycsar_Apyc1
Lactamase_B
Diphthamide_syn
Lactamase_B_2
GEX3_C
DUF8741
Motif
Other DBs
NCBI-GeneID:
4767069
NCBI-ProteinID:
XP_001321376
UniProt:
A2EDT7
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All DBs
Position
I:complement(<7871678..>7873847)
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AA seq
700 aa
AA seq
DB search
MESDTTSISFQPLSGAQSTTPFAYLLHVDEFTFLLDCGWTEDFRLEDIQTQIEICSHVNA
VLLSHASIEHIGALPYLCSHGLSAPIFATMPIPALGSLLIYDSYLNIRDEEEFKEFNAND
IDQAFQKINRMTYQQSEQLDGKNITITPYNAGNTLGGTVWRIVKGQNEVIYSVSVGDHSK
YLSSFSLESGLHPTLWILDARGPESHRDGKEDEFWRQIFGKLNGGKTIIFPTDGVSGSLE
VISRLKEQWKKVNWKWKIYFLSHSSPAVLKNAQSLSNYLSLDIQEKINSGEYPFEFNDPD
LSYFSCVTSIKDIDFSQGCVVISSTDTLERGFSRKLFLDKANSDNLIIFTQREPPYSLAE
ALRTNNAHRTFRFIIKHREPLTGEELVKFMEKQSALQEKANEIEGDISDESDEVSQENIE
NSSQIAQSLKKHFFQFKRKETSDLSDYGANIVVENYLKGANPMAPSKMDTSKMIDSSLTQ
QNFIQELVYKPSKFMITQYDYNFVGTAVFWNLERTSDYSTIAYNVTSFNPTDIIIIGAKK
ENCEELMKILKGKSPQNTRIYIPAIGEKVSLQRDLTTRKISLSRALLSGIDFVNCGVNDI
AYIEATLKADEHQQFVQARPVESSAGHQATFVGTIDMSQLSSKLDSLGINNDFKAGGVLE
CGRRRVKVRLVNEKSITVEGMICPDYIKVRNAIQDLLKMI
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgataccacaagtatttcatttcagccgctttctggagcccaatcaaccact
ccatttgcttatcttctccatgttgatgaattcacatttttattggactgtggttggaca
gaagatttcagattagaagatattcaaacacaaatagaaatttgttctcatgttaatgca
gttttgctttcacatgcctctatagagcatattggagcgcttccttatctttgcagccat
ggtttatccgctccaatttttgcaactatgccaattccagctcttggatcacttcttatt
tacgattcatatttaaacatacgcgatgaagaagaatttaaagaatttaatgcaaatgac
atcgatcaagcttttcaaaaaattaatcgtatgacatatcagcaatcagaacaacttgat
ggcaaaaacattacaattacaccatataacgcaggaaatacgcttggtggaaccgtctgg
aggatcgtaaaaggccaaaatgaagttatttactcagtttcagttggcgaccacagtaaa
tacctcagcagcttcagccttgaatccggattgcatccaaccctctggattctcgatgcg
cgaggcccagagagccatcgcgacggaaaagaagatgagttctggagacaaatatttggt
aagctaaacggcggcaaaacgattattttccctacagacggcgtttccggttctttggaa
gtaatttcgagattaaaagaacaatggaagaaagtcaattggaaatggaagatatacttt
ttatcacacagttctccagctgttttgaagaacgcgcagtcattatctaactatttatca
ttagatattcaagaaaagattaattcaggcgaatatccattcgaattcaacgaccctgat
ctcagttacttctcgtgtgttaccagtatcaaggatatcgactttagccaaggctgtgtc
gttatttcctcaacagatactttagaacgcggtttctcaagaaaattattccttgacaag
gccaactcggacaatctgatcatatttacccagagagaacccccttattcgttggccgaa
gccttaagaacgaataatgcccacagaaccttccgttttatcatcaagcacagggagcca
ttgacaggagaagagttggttaagttcatggagaagcaaagtgctctccaagagaaggca
aacgaaattgaaggagatatcagcgacgaaagtgatgaagtgagccaagaaaacatcgag
aactccagccaaatcgcacagtctctgaaaaagcacttcttccagttcaaaagaaaggaa
acttcagatttatcagattatggagcgaacattgtagtcgaaaactatctaaaaggtgct
aacccgatggctccttccaagatggatacgtcaaagatgatagattcctctcttacccaa
caaaatttcatccaagagctagtatacaagccatccaagtttatgatcactcaatatgac
tacaatttcgttggtacagccgttttctggaatctcgaaagaacttccgattattctaca
attgcttacaatgtaacaagcttcaatccgaccgatatcattataattggcgctaagaag
gagaactgtgaagaattgatgaagattttgaagggaaaatcccctcaaaatacaagaatt
tatattccggccattggagaaaaagtgtctcttcaaagggatctgaccacacgtaaaatt
agcctttcccgtgctttattgagtggaattgactttgtaaactgcggagtcaacgatatc
gcgtacattgaagcaactcttaaagcggatgagcaccagcagttcgtacaagcaagacct
gtcgaaagcagtgcaggacatcaagcaactttcgttggaacaattgatatgagccaactt
tcaagtaaactggattcccttggaatcaataatgacttcaaggctggaggtgtcttggaa
tgcggtagaagaagagttaaagtaagattagttaatgaaaaatcaattacagtcgaagga
atgatttgccctgattatattaaggttagaaatgctatacaagacttacttaagatgatt
tag
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