KEGG   Trichomonas vaginalis: 4768217
Entry
4768217           CDS       T01022                                 
Symbol
TVAGG3_0959040
Name
(RefSeq) pre-mRNA cleavage required for polyadenylation
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
tva  Trichomonas vaginalis
Pathway
tva03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tva00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    4768217 (TVAGG3_0959040)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tva03021]
    4768217 (TVAGG3_0959040)
   03019 Messenger RNA biogenesis [BR:tva03019]
    4768217 (TVAGG3_0959040)
Transcription machinery [BR:tva03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     4768217 (TVAGG3_0959040)
Messenger RNA biogenesis [BR:tva03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     4768217 (TVAGG3_0959040)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_2 Torus zf-CCCH_3 Mad3_BUB1_I WHD_lin-66 MAAL_C Chordopox_A13L zf-CCCH_DUS3L zf-CCCH_4
Other DBs
NCBI-GeneID: 4768217
NCBI-ProteinID: XP_001322507
UniProt: A2EAT1
LinkDB
Position
I:<9697030..>9697640
AA seq 166 aa
MWYFHNLQNQQQSLEFKFESVLKEVDQNEENDLKDYINKLSKKDRNSFHQVVCDKWVNTH
CVHGDRCQSLHEYDIDRMKKCQFWEKYHECSNKFECIFRHELTDRIGTDCQYYIRGYCKH
GDKCKRKHTPRDAVCLNYLAGFCPDGPKCLFAHPKWIDDSGIDKNV
NT seq 501 nt   +upstreamnt  +downstreamnt
atgtggtactttcataaccttcaaaaccagcaacagagcttagagtttaagttcgagtct
gtcttgaaagaggttgaccaaaatgaagaaaatgatttaaaagattacattaataaatta
tcaaaaaaagatagaaacagtttccatcaagttgtttgcgataaatgggttaacacccac
tgcgtccatggtgatcgttgccaatcattacatgaatacgatatcgatagaatgaaaaaa
tgtcaattctgggaaaaatatcacgagtgctcgaacaaattcgaatgcattttccgtcac
gaacttactgatagaatcggaactgattgccagtattatattcgtggttattgcaaacat
ggtgataaatgcaagagaaaacatacacctcgtgatgcagtttgcttaaattacttagca
ggattttgtccggatggtccaaaatgcctatttgctcatccaaaatggatcgacgattca
ggtatagacaaaaatgtataa

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