Trichomonas vaginalis: 4768434
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Entry
4768434 CDS
T01022
Symbol
TVAGG3_0980710
Name
(RefSeq) mismatch repair protein Msh6 (MutS-like protein)
KO
K08737
DNA mismatch repair protein MSH6
Organism
tva
Trichomonas vaginalis
Pathway
tva03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
4768434 (TVAGG3_0980710)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tva03400
]
4768434 (TVAGG3_0980710)
DNA repair and recombination proteins [BR:
tva03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
4768434 (TVAGG3_0980710)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
nSTAND3
AAA_29
Motif
Other DBs
NCBI-GeneID:
4768434
NCBI-ProteinID:
XP_001322723
UniProt:
A2EA54
LinkDB
All DBs
Position
I:13530633..13533911
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AA seq
1057 aa
AA seq
DB search
MSQRSLFSYFTAKNPTTPASSPVMKKQTAIRSLKKISSKAKDSSSDFELENTESESEDEK
EFNKVASEEKIMKLNKPSSSEYESESEQNFIDDDSDEEQKTPSKSRTRAKPAKSTKSRSI
KTTKAAVPFDAPPEVNHAQIAREASASVSEEDLPDWLTTKLRDKNKKRPDKEGYDPSTVY
IPETVKETFTPFQKQFWDIKENNFDAIVMIRKGKFYEMFSVDAIFARDVLKLHLTYRGKE
PMCGVPEKAFSEWAIKIINAGKRVCKVEQMETAIDQANRKGKGAEKAIQRKLVQVYSLGT
IDDFEMLESSQPSYLLSIRSSSRQTAGVCLVDCSTGTFHLGAVNEDDLADTLIRFEPVEV
IYSANNISPEHLAIIKHYCGNVATRAKTGSETWDSTLAMNTILKIAKWDNVPDSLENVHQ
DAIAALGGCVAYLNEHKIAESLLSLKRFKTLDEAGSSSFLSLDSSALTNLQIIGKDPHCL
INILDHCTTPFGRRRLRFWIMHPLRSINQIEERQKAVEELMKPDFNTLSKELKTIPDLER
MLSRVYSNKCSVKVFIDCLGALKKCCQFFTKIEGTVKSPLLANVVPPGKGKSLAKQIDDI
LAELEVEKSIQSNEFIVKKGVFKDIDDIDEEVSSIEDDLNDILRDIKREVGCKDLSYVNM
QSEKFQVQIPVKYCSDLPDKYILMSQTKSVRRYHTPEIKEKLKQLDIVENERQKLRSGSQ
KRFIDEFAKNSPIWDSIVDAIADIDCLISLAMTSIRWRASGVLCKPIFVQKDSPEAHGQA
ILQVEKMNHPCIIGTPIPNDIDIHDRFVLLITGPNASGKSTYARMCCVSIILAQIGCMLP
AVSAKMTCYDQIFTRIGASDRIFNGQSTFAVESSETARLMKHATSDSFVVLDELGRGTST
LDGIAIASSVLDFFINKVKCPLVFCTHYHVLAEEFEQFPMVRNASMKYEISNGNLTLAYT
LIDKMCPSSFGCRVAKICGLPADLTEEAQKVADDFEDRHAALRTSGIDVKVETIEERRDI
IDLKKAIDDLTGGVVNEQNFYKFMDFLSKELPKINVE
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaggtctcttttttcatatttcacagccaagaatccaaccactccagcatct
tcgcctgttatgaaaaagcagacagctatacgctctctgaaaaaaatttcatccaaagct
aaagattcaagttctgatttcgaacttgaaaatactgaaagcgaatcagaggatgaaaag
gaattcaacaaggtagcaagcgaagaaaagattatgaaattaaacaaaccttcttcttca
gaatatgaatccgaatcagaacaaaatttcattgacgacgatagtgatgaagaacagaaa
actccatcaaaatcaagaacacgcgctaaaccagctaaatcaacaaaatcaagatcaatc
aaaactacaaaagcagctgttccatttgacgctccaccagaagtcaaccatgctcaaatt
gctcgcgaagcatcagcatccgtcagtgaagaagatttaccagattggttaactacaaaa
ctcagagataagaacaagaagcgtccagataaagaaggttacgatccatctacagtttac
atccccgaaacagttaaggaaacctttacacctttccaaaaacaattttgggatatcaaa
gaaaacaacttcgatgcaattgtcatgatccgcaaaggcaaattctacgaaatgttcagt
gttgatgctatttttgcacgtgatgttcttaaattgcacttaacttatcgaggaaaggaa
ccaatgtgcggcgttccagaaaaagcattctcagaatgggccatcaaaatcatcaatgcc
ggaaagagagtttgcaaagtcgaacaaatggaaactgcaattgatcaggcaaatcgcaaa
ggaaaaggtgccgaaaaggcaatccaaagaaagcttgttcaagtctattcacttggaaca
atcgatgacttcgaaatgctcgaatcctctcaaccaagttatttattatctatcagatca
tccagccgtcaaacagcaggtgtttgccttgttgattgttcgacaggtaccttccattta
ggtgcagttaacgaagatgacttggcagatacattaatcagattcgaaccagtcgaagtt
atctattcagcgaacaacatctcacctgaacacttagcaatcatcaaacactattgtggt
aatgtcgctacacgtgctaagaccggttcagagacatgggacagtactcttgcgatgaat
actattttaaagatcgcaaaatgggataatgttccagattctcttgaaaatgttcatcaa
gatgcaattgcagccttaggtggatgtgttgcttatctaaatgagcacaaaattgccgaa
tctttgttatcattaaagagattcaagactttggatgaagcaggatcatcttcattcctt
tctcttgattcatctgcacttacaaacttacagatcattggaaaagatccacattgtctt
attaatatcttagaccactgcacaacaccatttggacgtcgtcgtcttcgtttctggatc
atgcatccactcagatccatcaatcaaatcgaagaacgtcaaaaagcagttgaagaatta
atgaaaccagatttcaacacgctttcaaaggagctcaagacaattcctgatctcgaaaga
atgctttcacgtgtttactcaaacaaatgcagcgttaaagttttcattgattgccttggc
gctctcaaaaaatgttgtcaatttttcacaaaaattgaaggaacggtcaaatctccgcta
ttagcgaatgttgttccaccaggaaaaggaaagtctcttgccaaacagatagatgatatt
cttgcagagcttgaagtcgagaaatcaattcaatctaatgaattcattgtcaaaaaaggc
gttttcaaagatatcgatgatattgatgaagaagtttcatcaattgaagatgatttgaat
gatatattaagagatatcaagcgcgaagttggctgcaaggatctttcctatgtaaacatg
caatctgagaagttccaagtccaaattccagttaaatattgctcagatcttcctgacaag
tatattttgatgtctcagacgaaatcagttagaagatatcatactcctgagatcaaagaa
aagctgaagcagttggacatcgtagagaacgagcgccagaagttgagaagcggatcacag
aagagattcatcgatgaattcgcaaagaattcaccaatttgggattcaattgttgatgca
attgctgatattgattgtttgatttccttggcaatgacatcaatcagatggagagcatct
ggtgttctttgcaaaccaatctttgtacaaaaggattctccagaagctcatggacaagcc
attctccaagtcgagaaaatgaatcatccttgcatcattggaacaccaattcctaatgac
atcgacatccacgatagattcgttcttttgattactggtccaaacgcttctggtaaatca
acatacgctagaatgtgttgtgtatcaatcatacttgcacagataggttgtatgctacca
gctgtttctgcaaagatgacttgttacgaccagattttcacaagaattggcgcaagtgat
agaatctttaatggccaatcaactttcgccgttgaatcatcagaaacagccagattgatg
aagcatgcaacaagcgattcatttgttgtactcgatgaactcggaagaggtacatcaaca
ttggatggcattgcaattgcttcttctgttttggatttcttcattaacaaagtcaagtgc
ccattggtattctgtactcactaccacgtattggcagaagagtttgaacagttcccaatg
gtaaggaatgcttcaatgaaatacgaaatcagcaatggaaatttgactcttgcttacaca
ttgattgacaagatgtgtccaagctcattcggttgcagagtcgcaaaaatttgcggattg
ccagctgatttaaccgaagaagctcaaaaagttgctgatgatttcgaagatagacatgct
gcattaagaacatctggaattgatgtcaaagtagagaccattgaagagagaagagatatc
attgatttgaagaaagctattgacgatttgaccggcggagttgtcaacgaacaaaacttt
tataagtttatggacttcctttcaaaggaattgccaaagataaatgtagagtga
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