Trichomonas vaginalis: 4769657
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Entry
4769657 CDS
T01022
Symbol
TVAGG3_0975050
Name
(RefSeq) beta'-COP family
KO
K17302
coatomer subunit beta'
Organism
tva
Trichomonas vaginalis
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tva04131
]
4769657 (TVAGG3_0975050)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tva04147
]
4769657 (TVAGG3_0975050)
Membrane trafficking [BR:
tva04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
4769657 (TVAGG3_0975050)
Exosome [BR:
tva04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
4769657 (TVAGG3_0975050)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_IFT140_1st
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_DCAF4
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_RIG_1st
TPR_GEMI5
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
VPS11_N
Motif
Other DBs
NCBI-GeneID:
4769657
NCBI-ProteinID:
XP_001323922
UniProt:
A2E6J4
LinkDB
All DBs
Position
I:complement(12572450..12574943)
Genome browser
AA seq
817 aa
AA seq
DB search
MIRIQYAKEKERNDNIFPSDRVSQISPPEMSLSKMKSLFVIPSSRVKCLDFHPTKPIILA
ALYTGEAIIVDALRGSIIRTYSVHQGIPLRACRWIPKTGDFVTGGDNRSLNFYSQVKGKQ
TLEIPDAHDHYIRSLAVHPNEMLLLSSSDDLSIKLWDISKGCTAIRTFQVHTGIVMDVKW
NPRDLTTFASCSLDGNVIFWDMGSEQPRFTQRVSNKCVNSISFAVNGDRSLIATGSDDTI
VTIIDLQSRSVVTTLEGHDNNVTRVEFHPTRPLIITTAEDNSTIIWSSITFRKENRLSSA
LERGWALGFSNCPPLMAIGHDKGLTIHKFKNLGTPMSLDPTGKLIIAQGAEVSVAVLKNM
PDFVDGSEITLPLKEGITSDQTPVHLHHSPNGRYITVCGENEWTIYTTLGFRSRAYGNGI
SFIWCSNSTSFAALNTNRLITVYKSFDDSQVLNVFALKIWGGELIGALVNNGLEFYDWED
LQLVRRIEVHPSEVLWYGNYVAIRTKTNIVVLSYNSEYQSEFVQGSGYEDSFDVVYDVDG
KASSICWANGILLFTDGQKVNRISAGIVLPTASFKNTVDLIGYLPREGVVLVADQMRTLL
GVHLPPNLLDFESAVAADEEADPELVDEDYRARTAKFLKQLGKNELALLVSNDTAMRFDL
AIELGELETASQCASDQTMWRRLARAAIGKGEMKLAEKALFECGDLSTLLVLYKSQNRKS
DIENLVTKAKEIGQLNVAFTAALAVGMFEECVDILIASEKYAQAAIFARTRCPKMMSKAV
QEWKKHTPNERISGAIADPADFPSLFDEIEPEESVQA
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgattagaatccaatatgcaaaagaaaaagagagaaatgataatattttcccttcagac
agagtttcacaaatcagtcctccagaaatgagcttaagcaagatgaaatcccttttcgta
attccgtcctcgcgtgtaaaatgcttggacttccatccaacaaagccaataatcttagct
gcgctttatactggtgaagctattattgttgacgcattacgcggttcaattataagaaca
tattcagttcatcaaggtataccacttcgtgcatgcagatggataccaaaaacaggcgat
tttgtcacaggaggtgataatcgttcattaaatttctacagccaagtcaaaggcaaacaa
acattagaaattccagatgctcatgatcattacattcgctcacttgcagttcatccaaac
gaaatgctattactttcttcatcagatgatttatcgatcaaattatgggatatttccaaa
ggatgcacagctattcgtacattccaagtccatacaggtatcgttatggacgtcaaatgg
aatcctcgcgatttaacaacgtttgcatcttgttctttagatggcaacgttattttctgg
gatatgggcagcgaacaaccacgctttactcaaagagttagcaataaatgcgttaactct
atctcatttgctgtcaatggcgacagatcattaattgctacgggttccgatgacacaata
gtcacaatcatcgacttacaatcacgttcagttgtcacaaccctcgaaggccatgacaac
aacgtcactcgcgttgaatttcatccaacacgtccattaatcataacaaccgccgaagat
aactctacgatcatatggtcatcaattacgtttaggaaagagaacagactcagttcagct
ctcgagcgtggctgggcccttggtttctctaattgtcctccattgatggcaatcggacac
gacaaaggccttacaatacacaaattcaagaacttgggaacacccatgtcccttgatcct
acaggaaagctcattattgctcaaggagccgaagtttccgttgctgtactcaaaaacatg
ccagatttcgttgacggatccgaaatcacgcttcctcttaaagagggaataacgtccgac
caaacgccagttcatttacatcactctccaaatggaagatacatcactgtctgcggagag
aacgaatggacaatatatacgacactcggattcagatcgagagcatatggaaatggtatt
tccttcatttggtgctcgaattcgacatcttttgccgcattaaacacaaatagactcata
actgtctacaagagcttcgacgactcccaggtcttgaatgtatttgctctaaagatctgg
ggtggcgagttaattggagctttggtcaacaacggcttggaattctacgattgggaagat
cttcaattagtcagacgcatagaagtccatccatcagaagtattatggtatggtaactat
gttgccatccgcacaaagacaaatatcgttgttctctcatacaattcagaatatcaatct
gaatttgttcaaggaagtggctacgaagactcatttgacgttgtctatgacgtcgatggc
aaagcttcgtcaatctgctgggccaacggcatacttttattcacagatggccaaaaagtc
aacagaatctcagccggcatcgttttgccaacagccagcttcaagaacacagttgattta
ataggttatctcccacgagaaggcgttgttttggttgcagaccagatgagaacattatta
ggagttcatttaccaccaaatctccttgatttcgaaagtgctgttgccgcagacgaagag
gcagacccagagctcgttgacgaagactacagagcacgtacagccaagttcctcaaacaa
ctcggtaaaaatgagttggcacttttagtttcgaatgacacggccatgagattcgatttg
gcgatcgagcttggagagctggagacagcaagccagtgcgcatcggaccagacaatgtgg
agaagattggctagagcggcaatcggaaaaggtgaaatgaaattggctgaaaaagcactt
ttcgaatgtggagatttgagtactttactggtactttacaagtctcaaaacagaaaaagt
gacatcgaaaatttagtaacaaaagccaaagaaatcggccaacttaacgttgcttttaca
gcagcgttggctgttggcatgttcgaggaatgcgttgacatacttattgctagcgagaag
tacgcacaagctgcaattttcgcaagaacaagatgtccgaagatgatgtcgaaggccgtc
caggaatggaagaaacatactccaaatgaaagaatctctggagcaattgcggatccggcg
gacttcccatcactattcgacgaaattgaacccgaagaaagtgtccaggcgtga
DBGET
integrated database retrieval system
