Trichomonas vaginalis: 4769730
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Entry
4769730 CDS
T01022
Symbol
TVAGG3_0040190
Name
(RefSeq) pseudouridine synthase protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tva
Trichomonas vaginalis
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tva03016
]
4769730 (TVAGG3_0040190)
Enzymes [BR:
tva01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
4769730 (TVAGG3_0040190)
Transfer RNA biogenesis [BR:
tva03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
4769730 (TVAGG3_0040190)
Prokaryotic type
4769730 (TVAGG3_0040190)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
4769730
NCBI-ProteinID:
XP_001323995
UniProt:
A2E6F9
LinkDB
All DBs
Position
IV:complement(6214335..6215375)
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AA seq
346 aa
AA seq
DB search
MGGIFSFIHKEVQLTTPLPESNRYLITKKPACVVIYFRYIGTGYHGLQYNEKVRTIDSDL
FEGLEKSGILPEGSYKRRGKIAWNEASRTDAGVHACGQLICFKSYEICDMECSQIPELIN
KNLPSDSTIKIMSCLCTNSPFPVKDFATHRKYNYLLPLHVFSSTDPDHLDYLRQKICPLF
IGQHNFHNYTNGTPKTYKGAQRFITDFTFGDVFTINGEEYVLFYIRGISFMLNQIRKMIS
MVTAASFNQVTPEEVSRSLTEETCRIQLLPGDGLFLDQIEYEEYMSKLKHPNPNNDIEFR
AWRPVIEEWKQKVLFPHIAQTIKKTDVFRSWQKNCLLQFPVQFVKE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgggcggaatatttagctttattcataaagaggttcaattaacaacaccacttccagaa
tcaaacagatatcttattaccaaaaaaccagcatgcgttgttatttattttcgctatatt
ggaacaggttatcatggtttgcaatataacgagaaagttaggacaattgactctgatttg
tttgaaggattagaaaaatcaggcattttgccagaaggttcctataaacgcagaggaaaa
atagcttggaatgaagcgtctagaacagatgctggtgttcacgcatgcggccaacttatt
tgctttaaatcttatgaaatttgtgatatggagtgttcacaaataccagaattaattaac
aaaaatcttccatcggattcaacaataaaaataatgtcttgcttatgtacaaattcacca
tttccagttaaagatttcgcaacacatagaaaatacaactatttactcccattacatgtc
ttttcatcaacagatccagatcatttagattatttacgtcaaaaaatatgtcctctcttc
attggccagcataatttccacaactatactaatggaacacctaaaacatacaaaggtgct
caaagatttattacagactttacttttggcgacgttttcacaattaatggcgaggaatac
gttctcttttacatcagaggcataagtttcatgctcaaccagattagaaagatgatatcc
atggttacagccgcttctttcaaccaagttactccagaagaagtttcgagatcattaaca
gaagaaacatgcagaatccagttattaccaggcgacggattattccttgatcaaatagag
tacgaagaatacatgagtaagctaaaacatccaaatccaaataatgatattgaatttcgt
gcttggagaccagttattgaagaatggaagcaaaaagttctgttcccacatatagcacaa
acgatcaaaaagacagatgtctttagatcatggcagaaaaattgcttattacaatttcca
gttcaatttgttaaagagtaa
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