Trichomonas vaginalis: 4770248
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Entry
4770248 CDS
T01022
Symbol
TVAGG3_0227780
Name
(RefSeq) spliceosomal snRNP assembly
KO
K11087
small nuclear ribonucleoprotein D1
Organism
tva
Trichomonas vaginalis
Pathway
tva03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4770248 (TVAGG3_0227780)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tva03041
]
4770248 (TVAGG3_0227780)
03032 DNA replication proteins [BR:
tva03032
]
4770248 (TVAGG3_0227780)
Spliceosome [BR:
tva03041
]
Complex A
U1 snRNP components
Sm proteins
4770248 (TVAGG3_0227780)
U2 snRNP components
4770248 (TVAGG3_0227780)
Complex B
U1 snRNP components
4770248 (TVAGG3_0227780)
U4/U6.U5 tri-snRNP components
4770248 (TVAGG3_0227780)
Complex C
U2 snRNP components
4770248 (TVAGG3_0227780)
DNA replication proteins [BR:
tva03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
4770248 (TVAGG3_0227780)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
eIF-6
SM-ATX
BPL_C
Motif
Other DBs
NCBI-GeneID:
4770248
NCBI-ProteinID:
XP_001324496
UniProt:
A2E4T4
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All DBs
Position
IV:complement(35624881..35625330)
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AA seq
111 aa
AA seq
DB search
MKLVHFLRKLVRETVTVELKDNTVIKGTVVGVDSAMNTHLRLVHIKAPGQEEKRLENLTI
RGASIRYVILPDVLNLDTLLVDDSPTKTRMRHGEAKEEKDRKPILFQQKKW
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgttcattttcttcgtaaactcgtaagagaaacagttactgttgagctgaaa
gataatacagtaatcaaaggaactgttgttggtgttgattcagcaatgaacacacatctt
cgtctcgttcatatcaaagcaccaggtcaagaggagaaacgtctcgaaaatttaacaatt
cgtggagcatctataaggtatgttattttacctgatgtactcaacttagatacactcctt
gtcgatgatagcccaacaaaaacaagaatgcgccatggagaagcaaaggaagaaaaggat
cgcaagccaatacttttccaacaaaagaaatggtaa
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