KEGG   Trichomonas vaginalis: 4770248
Entry
4770248           CDS       T01022                                 
Symbol
TVAGG3_0227780
Name
(RefSeq) spliceosomal snRNP assembly
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
tva  Trichomonas vaginalis
Pathway
tva03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tva00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4770248 (TVAGG3_0227780)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tva03041]
    4770248 (TVAGG3_0227780)
   03032 DNA replication proteins [BR:tva03032]
    4770248 (TVAGG3_0227780)
Spliceosome [BR:tva03041]
 Complex A
  U1 snRNP components
   Sm proteins
    4770248 (TVAGG3_0227780)
  U2 snRNP components
    4770248 (TVAGG3_0227780)
 Complex B
  U1 snRNP components
    4770248 (TVAGG3_0227780)
  U4/U6.U5 tri-snRNP components
    4770248 (TVAGG3_0227780)
 Complex C
  U2 snRNP components
    4770248 (TVAGG3_0227780)
DNA replication proteins [BR:tva03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     4770248 (TVAGG3_0227780)
SSDB
Motif
Pfam: LSM eIF-6 SM-ATX BPL_C
Other DBs
NCBI-GeneID: 4770248
NCBI-ProteinID: XP_001324496
UniProt: A2E4T4
LinkDB
Position
IV:complement(35624881..35625330)
AA seq 111 aa
MKLVHFLRKLVRETVTVELKDNTVIKGTVVGVDSAMNTHLRLVHIKAPGQEEKRLENLTI
RGASIRYVILPDVLNLDTLLVDDSPTKTRMRHGEAKEEKDRKPILFQQKKW
NT seq 336 nt   +upstreamnt  +downstreamnt
atgaagcttgttcattttcttcgtaaactcgtaagagaaacagttactgttgagctgaaa
gataatacagtaatcaaaggaactgttgttggtgttgattcagcaatgaacacacatctt
cgtctcgttcatatcaaagcaccaggtcaagaggagaaacgtctcgaaaatttaacaatt
cgtggagcatctataaggtatgttattttacctgatgtactcaacttagatacactcctt
gtcgatgatagcccaacaaaaacaagaatgcgccatggagaagcaaaggaagaaaaggat
cgcaagccaatacttttccaacaaaagaaatggtaa

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