Trichomonas vaginalis: 4771237
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Entry
4771237 CDS
T01022
Symbol
TVAGG3_1048870
Name
(RefSeq) Fip1 motif family
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
tva
Trichomonas vaginalis
Pathway
tva03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
4771237 (TVAGG3_1048870)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
4771237 (TVAGG3_1048870)
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
4771237 (TVAGG3_1048870)
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GFIT
Motif
Pfam:
Fip1
Shikimate_DH
COPI_C
Motif
Other DBs
NCBI-GeneID:
4771237
NCBI-ProteinID:
XP_001325484
UniProt:
A2E247
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Position
I:complement(<25496331..>25497033)
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AA seq
191 aa
AA seq
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MSSEQEAEKLTDEEKPKDENPIDENSKEEGNDEYDSDEYGSEEEESSESESDDIELDQDL
NVQAQMSAIAYSTRALIQPGPLNNYEAWITQSDIVTQGSKNPWEIINPSGVHPRNNKKSI
FYYDLSALPNDVESKPWTAPGADITDWFNYGFTEETWEEYRKTMLNRIKNIEYEQEIKSL
TGDTRQQVKRN
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagagcaagaagctgaaaaactaactgatgaggaaaagccaaaggatgagaat
ccaatagatgaaaattctaaagaagaaggtaatgatgaatatgatagtgatgaatatgga
tccgaagaagaagaatcttcagaatcagaatcagatgatatcgagttagatcaagatctt
aacgtccaggctcaaatgagtgctattgcatattcaacacgcgcattaattcaaccaggt
ccacttaataactacgaagcttggattactcaatcagatattgttactcaaggcagcaaa
aatccttgggaaattattaatccatctggtgttcatccacgtaacaacaagaaatctata
ttttattacgatctttctgctttgcctaacgatgtagagtcaaagccttggacagctcca
ggtgctgatattacagattggtttaattacggatttacagaggaaacatgggaagaatat
agaaaaactatgcttaatcgtatcaagaatattgaatacgaacaagaaattaagagcctt
actggagatacacgtcaacaagttaaacgaaattaa
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