Trichomonas vaginalis: 4772381
Help
Entry
4772381 CDS
T01022
Symbol
TVAGG3_0869240
Name
(RefSeq) DNA helicase RECQ family member family
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
tva
Trichomonas vaginalis
Pathway
tva03440
Homologous recombination
tva03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
4772381 (TVAGG3_0869240)
03460 Fanconi anemia pathway
4772381 (TVAGG3_0869240)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tva03032
]
4772381 (TVAGG3_0869240)
03400 DNA repair and recombination proteins [BR:
tva03400
]
4772381 (TVAGG3_0869240)
Enzymes [BR:
tva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
4772381 (TVAGG3_0869240)
DNA replication proteins [BR:
tva03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
4772381 (TVAGG3_0869240)
DNA repair and recombination proteins [BR:
tva03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
4772381 (TVAGG3_0869240)
Bloom's syndrome complex (BTR)
4772381 (TVAGG3_0869240)
FA (Fanconi anemia) pathway
4772381 (TVAGG3_0869240)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RQC
HRDC
Motif
Other DBs
NCBI-GeneID:
4772381
NCBI-ProteinID:
XP_001326616
UniProt:
A2DYY2
LinkDB
All DBs
Position
VI:complement(15263079..15267829)
Genome browser
AA seq
1447 aa
AA seq
DB search
MTPQVNSSDSKENNTIQAKIETNNFESNENLPTAELTGFDKKLIDYEQQMETLNMLIREK
LLNNPEDTEIESLRAERRYLYQQMEQFEEKVQKSKKYSSTPKPKLFTAIPKIDTRENRIT
ETPKAELPNRNSNDIKEEAPYEVIHDDDSLVNTIRETVDLYSPKTKLPDKKVNLVPETPA
TPKPATKSGEILDSPKPARRVSADNFDIPLIPKFTPKSFEEMQAQLAQRSNSNKSIDGSV
KGTPDNSTNASQRMNSTENVVSSSVVADNSTTGSQNRESSQLVSSRLLLNDGNSSGPIIQ
TGSVLPIPSKYMINDLEGEVEDTPNLIDDEEADGFMDNDNEIQVSISPALETKINEVNKK
VFKHSHFRGRQRDAIAAALNGEDVFVLMPTGGGKSLCYQLPGFIQMGVTIVISPLISLIQ
DQVRSLTELGLDAMAYGQETTAADYNEIVRKINNGRLRFLFMTPEKIMMGSINTRFIGSI
YEKKRLTRFVIDKAHCVSQWGHDFRPDYTQLGVLKTMYPDIPIMALTATATDAVQRDIKE
ILNIRNCHVFKSSFNRPNIFYEVIQKEENSKDEMIRWIKAHGYENSTGIIFCMTTPETVN
LSQYMNTKGFNTAYYHGKMENADRKKVQEMWMNNQIRVIVATLAFGMGIDKPDVRYVIHM
TMPRSLEAYYQESGRAGRDGKQSHCLLFFSMGDKARVHRLISYTESEEQIKNKDRLEVEE
NLLEHMAEYGLDKTTCRRVLLLSYFGEQFDPDNCGMTCDNCQKQNLNRAKIEYDLTAHMK
NIANLVNDINKKRKSSPYATTNYIIDVYVGSKAKKVTDSRDNNLPEYGLGVELRGAKKIF
IHQCLQELLRRNVLKMENHDSQYGVIEFFNASDGFQTKVQNLQPFIYAEYVESEGDELSR
EDMFIFKELVKMRDFLIQDANRESFMPSTMLQLIAKIKPKTTEELKKMKVMNKGRMDRLG
HAILNVLNSGQFNPEGIQSNLHKYQGHITPSAIPSQQQIPPPPPPVQQTPRKTRGRKKKN
AQSETQATEDQTQQQSSVSLPLPQPQQQSPNIPTIPPQQSIPVNPPQQNVLVNPPQQNVS
INPSQQQNVSINPPQQQNVPVIPMKQPVIPPTSGTMPRNIPNQQNSSVQQNIPASNQQVP
IRQPNAPITVQPNTPSTQQRPVQTPQSYPSQQNIPKPNIPKVPQTLPPDLDIVIPVGHTP
PHSQNKPKNRQAKYLESQAINYQMPPPRTVPAPDFEEITASSQREKKNTANSTPKKSPTI
VQIPQNIIAANIAMAQQQKAQANSTPQQKPKHYIAPIPEEIVEEERQQMQTPTQQQAPPK
PTPPPFKPIHHPETYLIDSDSSVEEVPSTPVKPINTPAQQNNIPNSPSPAILQNNISQKQ
IPSTPVVSQSKEPQTPQRSEISPAPTPPRQAMDQMGAGIPPPPKNITPEVAAWLAQVFTQ
MAQNGSQ
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgacacctcaagtaaatagttcggattcaaaagaaaataatacaattcaagccaaaatt
gaaacaaataattttgaaagtaacgaaaatttaccaaccgcagagcttactgggtttgat
aaaaagcttattgactacgagcaacaaatggaaacgcttaacatgctaatacgagaaaaa
ctcttgaataatccagaggatacagaaatcgagtctctaagagctgaacgtagatatcta
taccagcaaatggagcaatttgaagaaaaagtacaaaaatctaaaaaatattcttcaact
ccaaagccaaaactattcacagcaattccaaaaattgatacgcgtgaaaatagaattact
gagactcctaaagccgaattaccgaaccgtaattcgaatgatatcaaggaggaagctcct
tatgaggtaattcatgatgatgattcactggttaatacaattcgtgaaactgtagatttg
tattcaccgaaaactaagctgcctgataaaaaagtaaatttagtaccggaaactccagca
acgccaaagccagctacaaaatcaggtgagattcttgattctccaaagcctgctcgacga
gttagcgctgataactttgatattccgctgattccgaaatttacaccgaaatctttcgaa
gaaatgcaagctcaacttgcacagcgtagtaacagcaataagagtatcgatggaagtgtt
aaaggtactcctgataattcgacaaatgcaagtcagagaatgaattcgactgaaaatgta
gttagtagctctgtagtggcagataactccacaactggaagtcaaaatcgcgaaagtagt
caattggtaagttctcgtttgttattaaatgatggaaattcgtctggtccgataattcaa
acaggtagcgtccttccaataccatcaaagtacatgatcaatgatttggaaggtgaagtt
gaagatacaccaaatcttattgatgatgaagaagctgatggattcatggataacgataat
gaaatacaggttagtatttcaccagctttagaaacgaaaataaatgaagttaacaagaaa
gtctttaagcattctcattttagaggccgtcaaagggatgcaattgcagcagccttaaat
ggcgaagatgttttcgtattaatgccaacaggaggtggaaaatctctttgttaccagctt
cctggattcattcaaatgggtgttaccattgtaatttctcctttaatttctttaattcaa
gatcaagttcgatcattaacagaattaggacttgatgcaatggcatatggccaagaaaca
acagcagcagactataatgaaatagttagaaagataaataatggaagattaagattctta
tttatgactccagagaaaatcatgatgggctcaataaatacaagattcattggttctatc
tatgagaagaagagattaacaagatttgttattgataaagctcactgtgtaagccaatgg
ggacatgattttcgtcctgattacactcaacttggagttttgaagacaatgtatcctgat
attccaatcatggcgttgacagctacagcaacagatgcagtacaaagagatatcaaagaa
attcttaatattaggaattgccacgttttcaaatcatctttcaacagaccaaatattttc
tacgaagtcattcaaaaagaagaaaattcaaaggatgaaatgattagatggatcaaagca
catgggtatgagaattccacaggaatcatcttttgtatgacaacacccgaaacagttaat
ttatcccagtacatgaatactaaaggatttaatactgcttattaccatggaaaaatggaa
aatgccgatcgtaagaaagttcaagaaatgtggatgaataaccaaatcagagtcattgtt
gcaacactagcatttggaatgggtattgataaacctgatgttagatatgtcattcatatg
acaatgccaagatcactagaagcttattatcaagaaagtggaagagctggacgtgatggt
aaacaaagtcactgccttttgttcttttctatgggtgataaagcaagagttcatagacta
atttcttatactgaaagcgaagaacaaataaagaataaagacagattggaagttgaagaa
aatctattagaacatatggcagaatatggcttagataaaacaacatgcagaagagttttg
cttttgtcttatttcggagaacaattcgatccggataactgtggtatgacatgtgataat
tgtcaaaaacagaatctcaatcgagctaaaatcgaatatgatttgacagcgcatatgaag
aatattgcgaatttggttaatgatatcaataagaaacgcaagtcatctccatatgcaacg
acaaattatattattgatgtttatgttggttccaaagccaaaaaagttacagattcaaga
gataacaatctccctgaatatggtttaggagttgaacttagaggagcgaagaaaattttt
attcatcaatgtttgcaagaattactaagaagaaatgttttgaaaatggaaaatcatgat
tcacaatatggagtcatagagtttttcaatgcttctgatggatttcaaacaaaagttcaa
aatttgcaaccatttatttatgcagaatatgttgaaagcgaaggcgatgaattatcaaga
gaagacatgttcatattcaaggaattggtaaagatgagagatttccttattcaagatgca
aacagagaatcatttatgccttcaacaatgctgcaactcatcgctaaaattaagccaaag
actacagaagagttgaagaagatgaaggttatgaataaaggaagaatggatcgacttggt
catgcaatattaaatgttttgaatagcggtcaattcaatcctgaaggaattcaatcgaat
cttcataaatatcaaggacacattactccatcagcaattccttcacaacaacagattcca
ccacctcctccaccagtccagcagactccaaggaaaactagaggaagaaagaagaagaat
gctcagtcagaaactcaagccactgaagatcaaactcaacagcaaagttcagtttctttg
ccacttcctcaaccccagcaacagtcaccaaatattccaactattcctcctcaacaaagt
ataccagttaatcctcctcaacaaaatgttctagttaatcctcctcaacaaaatgtttca
attaatccttctcagcagcagaatgtttcaattaatcctcctcaacagcagaatgttcct
gttattcctatgaaacaaccagtcattccgccaacttctggaactatgcctaggaacatt
ccaaatcaacaaaactcatctgttcaacaaaatattccagcatcaaatcagcaagttcca
atcagacaacctaatgctcctatcacagtgcaacctaatactccttcaacgcaacaacga
ccagttcaaactcctcaaagttatccatctcagcagaatattccaaagccaaatattcca
aaagttccgcagactctacctccagatttggatattgttatacctgtaggtcatactccg
cctcattctcaaaacaagccaaagaatcgacaagccaaatatcttgaaagccaagccatt
aattatcaaatgcctccaccaagaacagttcctgctccagattttgaagaaattactgct
tcatctcagagagaaaagaaaaatactgcaaactcgacaccaaagaaatctccaacaatt
gttcagattcctcaaaatatcattgctgcaaacattgcaatggcacagcaacaaaaagct
caagcaaattctactccacaacaaaaaccaaaacattatattgccccaattccagaagaa
attgttgaagaggagcgacaacaaatgcaaactcctactcagcagcaagctccaccaaag
cccacaccaccaccatttaaacctattcatcatccagaaacatatttaattgattctgat
tcaagtgttgaagaagttccttctactcctgttaagcctatcaatacacctgctcaacaa
aacaatattcctaactctccttcacctgctatattacaaaataacatttcccagaagcag
ataccatcaactccagttgtttctcagtcaaaagagcctcaaactcctcaaagaagtgag
atttctcctgctccaactcctccaagacaagcaatggatcaaatgggagctggaattcct
ccacctccaaagaacattacaccagaagttgctgcatggcttgcccaagtctttacacaa
atggcacaaaatggaagccaataa
DBGET
integrated database retrieval system
