Trichomonas vaginalis: 4772470
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Entry
4772470 CDS
T01022
Symbol
TVAGG3_0538660
Name
(RefSeq) histone deacetylase class I, eukaryotic type family
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
tva
Trichomonas vaginalis
Pathway
tva03082
ATP-dependent chromatin remodeling
tva03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
4772470 (TVAGG3_0538660)
03083 Polycomb repressive complex
4772470 (TVAGG3_0538660)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tva03036
]
4772470 (TVAGG3_0538660)
Enzymes [BR:
tva01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
4772470 (TVAGG3_0538660)
Chromosome and associated proteins [BR:
tva03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
4772470 (TVAGG3_0538660)
HDAC complexes
Sin3A-HDAC complex
4772470 (TVAGG3_0538660)
BRAF-HDAC complex
4772470 (TVAGG3_0538660)
REST complex
4772470 (TVAGG3_0538660)
SHIP complex
4772470 (TVAGG3_0538660)
MiDAC complex
4772470 (TVAGG3_0538660)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
4772470 (TVAGG3_0538660)
Heterochromatin formation proteins
Other heterochromatin formation proteins
4772470 (TVAGG3_0538660)
Chromatin remodeling factors
NuRD complex
4772470 (TVAGG3_0538660)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
4772470
NCBI-ProteinID:
XP_001326705
UniProt:
A2DYU2
LinkDB
All DBs
Position
II:complement(<13360905..>13362113)
Genome browser
AA seq
394 aa
AA seq
DB search
MKKRIVYFYDDDIGNFMYNQGHPMKPHRIRMAHNLIMAYELFSSMRVLRPRRATALDMTR
FHTDEYVQFLQVATPKNTSGDDPVLEKFNIDGDSPVFNGVFEFCQISAGGSISGAQELIS
GKCDIAINWAGGLHHAKKAEASGFCYCADCVLGILKLLDRYDRVMYIDIDIHHGDGVEEA
FYTTDRVLTVSFHKYGDDFFPCTGNKNDIGIDRGKGYAVNVPLSDGLDDAAFESIFKPVM
SRLIEWYRPGAILLQCGADSLTGDRIGCFNLTLKGHAMAVEFIKNLKIPLLVTGGGGYTV
RNVARCWAYETAVLTETPISDELPYNEYMGYFGPDYRLHLQPSNMENTNSEQDLNDLMQL
IDNHMKDAQAAPSVDWALGVGTQKKIDALGNVVN
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagagaatagtttacttctatgatgatgatattggaaatttcatgtataatcaa
ggtcacccaatgaaaccacatcgtatacgtatggcacacaacttaatcatggcgtacgaa
ctattttcaagtatgcgtgttttgagaccacgccgtgcgaccgccctcgatatgacaaga
tttcatacagacgaatacgttcaatttttacaagttgcaacaccgaaaaatacaagtggc
gacgatccagttttagaaaaattcaacatcgatggagattcaccagttttcaacggagta
tttgaattctgtcaaatatctgcaggtggttctatctccggagctcaagaattaatttca
ggaaagtgcgacattgcgattaactgggccggtggtctccaccacgccaagaaagccgaa
gccagtggtttctgctactgtgcagactgtgttcttggtattctcaagttattagatcgt
tacgacagagttatgtacattgatattgatattcaccatggcgatggcgttgaagaagcc
ttctatactactgatcgcgtacttacagtatcattccacaagtatggtgatgatttcttc
ccatgcacaggcaataagaatgatatcggcatcgaccgcggaaaaggttatgccgtcaac
gttcctctcagcgacggacttgacgatgccgccttcgagagcatcttcaaaccagtcatg
agccgtctcatcgagtggtacaggccaggagccattcttctccaatgcggagcagattct
ttgacaggagacagaattggatgcttcaacctcactctcaagggtcacgccatggccgta
gagttcatcaagaacctcaagatccctctcttggtcacaggaggtggtggttacacagta
agaaatgtcgcaagatgctgggcatatgaaacagccgttttgacagaaacaccgatatct
gatgaattaccatataacgagtatatgggatacttcggtcctgactacagattgcacttg
cagccttcaaacatggaaaacacaaattctgaacaagatctgaatgacctcatgcagtta
atcgataatcacatgaaggatgcacaagcggcaccatcagtcgattgggcacttggtgtt
ggtactcagaagaagatagatgctctcggcaatgttgttaattag
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