KEGG   Trichomonas vaginalis: 4774835
Entry
4774835           CDS       T01022                                 
Symbol
TVAGG3_1000570
Name
(RefSeq) mRNA splicing, via spliceosome
  KO
K12834  PHD finger-like domain-containing protein 5A
Organism
tva  Trichomonas vaginalis
Pathway
tva03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tva00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4774835 (TVAGG3_1000570)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tva03041]
    4774835 (TVAGG3_1000570)
Spliceosome [BR:tva03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    4774835 (TVAGG3_1000570)
 Complex B
    4774835 (TVAGG3_1000570)
 Complex C
   U2 SnRNP specific factors
    4774835 (TVAGG3_1000570)
SSDB
Motif
Pfam: PHF5 EDR4-like_1st DUF3173 DZR
Other DBs
NCBI-GeneID: 4774835
NCBI-ProteinID: XP_001329047
UniProt: A2DS54
LinkDB
Position
I:complement(<17190271..>17190612)
AA seq 113 aa
MMNPDSIKCGGRPGPEFGLVCEACEGRCPICNAPVKEDRCVPVHICGECSFGQLRDKCIV
CSAPAKYKAYYCEQCSLLGKDRDGCPRIINVGINRSDRFYERKRVTVIPEQKF
NT seq 342 nt   +upstreamnt  +downstreamnt
atgatgaatcctgattctattaaatgtggtggacgtcctggacctgagtttgggcttgta
tgtgaagcttgtgaaggtagatgtcctatttgcaatgccccagtgaaagaagatcgatgc
gttccagtccatatttgcggcgaatgctcttttggacaattacgtgacaagtgcattgtt
tgttcagcacctgctaaatataaagcatattattgcgaacaatgctctttgttaggaaaa
gatcgtgatgggtgcccaagaattattaatgttggaattaatagatcagatagattctac
gaaagaaaacgagttacagttattccagaacaaaaattttaa

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