Trichomonas vaginalis: 4775264
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Entry
4775264 CDS
T01022
Symbol
TVAGG3_0936580
Name
(RefSeq) programmed cell death protein 11 pre-rRNA processing protein rrp5 family
KO
K14792
rRNA biogenesis protein RRP5
Organism
tva
Trichomonas vaginalis
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tva03009
]
4775264 (TVAGG3_0936580)
Ribosome biogenesis [BR:
tva03009
]
Eukaryotic type
90S particles
Other 90S particles
4775264 (TVAGG3_0936580)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
OB_PDCD11
S1_RRP5
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
Suf
HAT_PRP39_C
DUF8501
PPR
REV1_C
Motif
Other DBs
NCBI-GeneID:
4775264
NCBI-ProteinID:
XP_001329471
UniProt:
A2DQY1
LinkDB
All DBs
Position
I:complement(<5876588..>5881406)
Genome browser
AA seq
1601 aa
AA seq
DB search
MEADASSKGKAPQPKDNKIKKEKLFGTKSKNAKSKKQKKSGVKVPSLPKAEDFCQGCITL
ASILSFQDDMIFLELPGNARGTLQLTEINDPFLQRLQHAIKNDEELPELENFFNIGDFLM
ATVISAGTHPVELSIRPNLVNSMIEPEEGRIFWGAVKSKEDRGYIIDLGKENVTAFLPFP
AQLEVGQPAFVTLLKKTSESIYKCELTKKDFFPSVPTVKPFFDTLRPIDVLDGLVTSNFT
NGALAINAQSFNGFCSKYSWPPGLTNGNNVQVRPVLIDHAQKTIWFTAIPRIVNGERPYC
LDAKIGSKVTSKVSRIRYNVGIEFTMPDNENLRVFIPEKETKSHALMAGQDHVVRITERR
PIDDLLLAADDPEIIDLAVFSADDVHPGQILDATISAINDKIGIFVELSPFLTALCPVSY
CDNDPEPKKGDVKKCVVLSVSEGHVRVAMKEKFVTSELPRVESLEIAHNLCESKEWTHAL
VRKSGKSAIIVEFINGLVGMIRSSSLPVSQGQDISKQYPQGYVIKTMISSVDGDKINCVV
STDESQILTLGQTCTVTVDRFTEDAVYVRVPAKYGEINSVIQATHFSDYEPLSRLIFKNL
NIGDKLRHACLIRNPGTNAPAYFTMKRCIRENTESIPKDTKSIKAGEHYFGFVSGIQNYG
SFVSFFGRASGLIHSRQLTLGDSVNAFVDQVTEDGHIRLTTPIADGESIKFLDSFLKDAK
KLNDKYLIDQEIQVQGDGEKSDEYFSYQLDEDWICLTNEKVKAGTTLKIAYADVLSKSVF
AVLPPKKPRSIENNVVVKATVIGVFEPIFICTVNGRIVICPMVNYNNKTEKKIAVGEELE
ITVVDSRSESDETFEVLKGYPQYLLKSEISQNVVATITSVNDISCNAKLNDGRTVRIHRS
QLSQVPEVGQQVKGSLMNGDNATFLITNPDSPQKIEDFKVGQQVTGVITKVSNDSLRLSM
SPFVLGTVSSLQLSSTNRKVVDKPLAESYSVGDLFEGWVSSVSEKMITVTGIDPSFSSNV
EFAKVLKIKTGDYATVKVGNGSLKKLDVTDVIDEYQFNPLSRLKKGKVIDVVNVSEENVS
MKLSDITGTPKEIKIEEGEILQGYVCHAIKGALLVRLARNVTGRLPFGSIADCFIQDAAA
LYPLGTVVTVKIMKKTDSEITLSSKRSDITGVALTIQDLKVGDVVGGFITAANKNGVFVR
LNDYQNKSGLVHHSMLNGKDPLSFVNLVNTRVDVEVLQVDLEKERISLKFNEIHSQNQPQ
EQEQQQEMETESDEGAEPEEVEIDLDEWLSDEEKVDEEEKEKEIRRKQTEEDIQRLEAKQ
IDPSAPKSDKEFTAALVANPHSSKLWISYMEFVYAGGDSKRAMEIGEQGLDKLPIGEKTE
KSNIFQALITLIVLSAEPKHFMEECIPIVERAAQTIDEEVMWLRFAKTVHQNRKDFSQEA
WKVALRKVKQNVTMWSSYLNSLLQDKKVDFAKDELKRCLSGTFQGLAKESVEVRKQFGIS
EYENEYTEHGRTMFENLINEFPTKYQLWNAYVDAECKYGEHLKARNIFERMTTLDLKIDR
MKQTLKKWRAFEEKNGNDPAIRKKINKIASEFSKRVIQAGN
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagacgcctcctcaaaaggtaaggccccgcaaccaaaagacaacaaaattaaa
aaggaaaaactctttggaactaaatccaaaaacgcaaaatctaaaaaacagaagaaatct
ggagtaaaagtcccatctcttccaaaagccgaagatttttgccaaggatgtatcacactc
gcatcaattctatcgttccaggatgatatgatattccttgagcttccaggaaatgcccgc
ggcacacttcaactcactgaaatcaacgatccattccttcaacgccttcaacacgcaatt
aaaaacgacgaggaacttcctgaattagaaaatttcttcaatattggagacttcttgatg
gcaacagtcatttcagccggaacacatccagttgaactctcaatacgtccaaatcttgtt
aactcaatgattgagccagaagaaggacgcattttctggggtgcagtcaaatcaaaggaa
gatcgtggttatattatcgatcttggcaaggaaaatgttacagcattccttccattccca
gctcagctcgaggttggtcaaccagctttcgtcacattacttaagaagacttcagaatca
atttataaatgcgaattaacaaagaaagacttcttcccatccgttccaaccgtcaagcca
ttcttcgatacactccgtccaatcgatgttctcgatggcctcgttacttctaatttcaca
aatggcgccctcgcgatcaatgcacagtctttcaacggattttgctcgaaatactcatgg
ccacctggtcttaccaatggaaacaacgtccaagtcaggccagtcttgatcgaccacgca
caaaagacaatttggttcacagccatcccccgtatcgttaacggcgaacgcccatactgc
cttgatgccaaaatcggctctaaagtcacatcaaaagtatcgcgcatcagatataacgtt
ggtatcgaatttacaatgccagataacgagaatttacgtgtctttatccccgaaaaggag
acaaagagccatgctcttatggctggccaagatcatgttgtccgcattacagagagaagg
ccaattgatgatctcttgctcgcagctgatgatccagagatcattgaccttgctgtcttc
tcagctgatgatgttcatccaggacaaatcttagatgccacaatttcggccatcaacgac
aagatcggcattttcgtcgagttatctccattccttacagccctctgcccagtcagctac
tgcgacaatgatccagagccaaagaaaggagatgtcaagaaatgcgtcgttctttcagtt
tctgaaggccatgttcgtgttgccatgaaggaaaagttcgttacaagtgaacttccacgt
gttgaatcccttgaaatcgctcataatttatgcgaatctaaggaatggacacatgcactt
gtcagaaagagtggaaagtccgccattattgttgaattcatcaatggacttgttggcatg
atcagatcctccagtttaccagtatcacaaggccaagatatctccaaacagtatccacaa
ggctatgttatcaagacaatgatctccagtgtcgatggtgacaagataaactgcgttgta
tcaacagacgagtcacaaatccttactctcggccaaacatgcactgtaactgttgacaga
ttcacagaagacgcagtttatgtccgtgttccagccaaatacggtgaaatcaactctgtc
atccaagccacacatttctctgattacgagccactctccagattgatcttcaagaactta
aacattggagataaactgagacacgcttgtttgatcagaaatcctggcacaaacgctcca
gcatatttcacaatgaagcgctgcatcagagagaacacagagtccattccaaaggacaca
aagtcaatcaaggccggagaacactatttcggatttgtttcaggtatacagaattacgga
tcctttgtttctttcttcggaagagcatcaggattaattcactccagacaattaactctt
ggtgattccgtcaatgcttttgttgaccaagtaacagaagatggacatatcagattgaca
acaccaattgctgatggcgaatccattaaattcctcgattctttcctcaaagatgccaag
aaattgaatgataaatatttaattgaccaagaaatacaagttcaaggtgatggagaaaaa
agtgacgaatatttctcatatcaattggatgaagactggatctgcttaacaaacgaaaaa
gtcaaggcaggaacaacattaaagatcgcatacgctgatgtactttccaaatcagtattc
gctgttttgccaccaaagaaaccacgttcaattgaaaacaatgttgttgtcaaagcaaca
gttatcggtgttttcgagccaatcttcatttgcacagtcaacggacgcatcgttatctgt
ccaatggttaactacaacaacaagacagagaagaagatcgctgttggcgaagaactcgag
ataacagtcgttgattcaagaagtgaaagcgacgaaacattcgaagttctcaagggatat
ccacaatatcttttgaagagcgaaatctcccaaaatgttgtcgcaacaatcacttccgtc
aatgatatctcctgcaacgcaaaacttaatgatggaagaacagttcgtatccatagaagc
cagttatcacaagttcctgaagtaggacaacaagttaagggttcattaatgaatggtgac
aatgcaacattcttaataacaaaccctgattctccacagaaaatcgaagatttcaaagtt
ggccaacaagttacaggtgttatcacaaaagtttctaatgattcattgagattatcaatg
tctccatttgttcttggtactgtttcatcactccagttatcaagtacaaacagaaaagtt
gttgataaaccattggctgaatcttattccgttggagatttgttcgaaggctgggtttca
tctgtttcagagaaaatgatcactgttacaggcatcgatccatcattttcttccaatgtc
gaattcgcaaaagtcctcaagataaagacaggagattacgcaactgtcaaagtaggaaat
ggatcattgaagaaactcgatgtcacagatgtaatcgatgaataccagttcaatccatta
tcacgtctgaagaaaggaaaagtcatcgatgtcgtcaatgtttctgaagagaatgtttca
atgaaactctcagacatcacgggaacaccaaaggaaattaagatcgaggaaggcgaaatc
ctccaaggatacgtctgccacgcaatcaaaggcgctttgttagttagattggcaagaaac
gtaacaggaagacttcctttcggatcaatcgctgactgcttcattcaagacgctgcagct
ttgtatccacttggaactgttgttactgttaaaatcatgaagaagactgattccgagatc
actctttcctcaaagagaagtgacataactggtgttgctttgacaatacaagatctcaaa
gttggtgacgttgtcggcggattcatcactgctgcaaacaagaatggtgttttcgtaaga
ttgaatgattaccagaacaaatccggtttagttcaccactcaatgttgaatggaaaggat
cctctttctttcgtcaatcttgtcaatactcgtgttgatgtcgaagttcttcaagttgac
cttgaaaaagagagaatttcactcaaattcaatgaaattcactcacagaatcaaccacaa
gaacaagagcaacaacaagagatggagacagaaagcgacgaaggagcagaaccagaggaa
gtcgagattgatttggacgaatggttaagtgacgaagagaaagtcgatgaagaagagaag
gaaaaggaaatcagaaggaaacaaacagaagaagatattcagagattggaagccaaacaa
atcgatccttcagctcctaaatcagataaagaattcactgctgctttggttgcaaatcca
cattcttcaaagctctggatttcatacatggaattcgtctacgctggtggagattccaag
agagcaatggagattggcgaacaaggcttagacaaattaccaattggcgaaaaaactgag
aaatcaaacattttccaggctttgattactttgattgttctctcagcagaaccgaagcat
ttcatggaagaatgcatcccaatcgttgagagagctgcacagacaatagatgaagaagta
atgtggctgagattcgctaaaacagttcatcagaaccgtaaagatttcagccaagaagct
tggaaagttgctttgagaaaagtgaagcaaaacgttacaatgtggtcatcatatttgaac
tcattgttacaggacaagaaagttgacttcgccaaggacgaattgaagagatgcctcagc
ggaacattccaaggattggccaaggaatcagtagaagtcagaaaacaattcggtatcagt
gaatatgaaaatgaatatacagaacatggtagaacaatgtttgagaacttaataaatgag
ttcccaacaaagtatcagctatggaacgcctacgtagatgcagaatgcaagtacggagaa
catcttaaggcaagaaacatcttcgagagaatgacaactctcgatttgaagattgataga
atgaaacagacattgaagaaatggcgcgcattcgaagaaaagaatggtaatgacccagcc
attagaaagaagatcaataagatcgcttctgaattctctaagcgtgtcattcaagcaggg
aattaa
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integrated database retrieval system
