Trichomonas vaginalis: 4775578
Help
Entry
4775578 CDS
T01022
Symbol
TVAGG3_0552350
Name
(RefSeq) DNA2/NAM7 helicase family
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
tva
Trichomonas vaginalis
Pathway
tva03013
Nucleocytoplasmic transport
tva03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
4775578 (TVAGG3_0552350)
03015 mRNA surveillance pathway
4775578 (TVAGG3_0552350)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
4775578 (TVAGG3_0552350)
Enzymes [BR:
tva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
4775578 (TVAGG3_0552350)
5.6.2.5 RNA 5'-3' helicase
4775578 (TVAGG3_0552350)
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
4775578 (TVAGG3_0552350)
mRNA cycle factors
Common to processing body (P body) and stress granule
4775578 (TVAGG3_0552350)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
UPF1_Zn_bind
AAA_11
AAA_30
AAA_19
UvrD-helicase
Viral_helicase1
Helicase_RecD
ResIII
nSTAND3
SLFN-g3_helicase
AAA_22
AAA_16
DEAD
SRP54
NPHP3_N
AAA
AAA_28
KDM6_GATAL
UvrD_C_2
AAA_32
AAA_7
AAA_24
RNA_helicase
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
4775578
NCBI-ProteinID:
XP_001329696
UniProt:
A2DPW5
LinkDB
All DBs
Position
II:15887121..15890023
Genome browser
AA seq
882 aa
AA seq
DB search
MTEKKQANDRAWSANDNAVKGSVGYTPKEDPTIDDEPQEELVIDRPCCSYCLCDIPECLV
KDKAIGRWFCNGRGKALHSHIIHHLVKSRHMEIELPPQNPYSQIPMTCYLCHSTNIFRLS
FVQSQKTGKYFVLCRECCNDPQLHLYSLDLAHRQLIVQQTQMLEWLVRPPSHAESKDGFR
FCDITPTDMDLLEETWPKNPNATILDLPQIRKSTTIPKTKPTYKDIRDYATTYNTLVKLE
MDYDKQVTESMIYRNVKINFKREGYNRFTGTFSFPISETSRPINIGDTFLVKCGAYEAKG
SLERTLGVGEIELLFIRQPTPPEDAIFTVQLVWLDTSFVRMIGAIAKMPQSPQTSTANII
KEVIMGHLPDTIPTLPGEPNRSPVVKGIPTLNLSQVNAVSYALKSPFCMIQGPPGTGKTT
TIAALVTRFLQAKAGPVLVCAPSNAAVERVTEAIASTHASVCRVISTSRTDIEAIDDKYA
LHNMVYSLDCAESRRLNDMLIERSNRDFSEDEEKKFKDLRKSLENRVIDAADVITCTCIT
SADPRLATKVFPTVIIDEATQAVEPEILIPIMHGSKQVCLVGDHMQLGPVVTNPKCVEAG
LGNSIVQRLVQLGLRPQRLLTQYRMHPVLSEFPSNTFYDGELMNGIPAEKRTPQQPVFNW
PKPSFPLMFYNNVNNEEEISNSGTSYINAFEATIVSQIVTQLCKAGVDPQQIGIISPYSG
QKFYLQNFLASMATLPSSFYQRLAIASVDSFQGGEKDYIIMSCVRCNPHGSIGFLKDYRR
LNVALTRAKYGLIIVGCARVLSKSILWYNLLRHCQEQHVLVEGSIMDLKESPCVLQKPSV
KQSEIFPGIPVGEFGKDMVPNTVESNFDNDDNDGEAYFNTVS
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaaaaagcaggctaatgatcgagcatggtcagctaatgataacgctgtcaag
ggctctgttggatacactccaaaagaggatccgacaattgatgatgagccacaagaagag
cttgtaattgaccgtccatgctgctcttactgcctttgtgatattccagaatgccttgtc
aaggacaaagcaataggcagatggttctgcaacggccgtggaaaagcgttacactcacat
atcattcatcaccttgttaaatcacgccatatggaaattgaacttccaccgcagaatcca
tactcacaaattccgatgacatgctatctttgccactctacaaacattttccgtttgagt
tttgttcaatctcagaaaacaggcaaatatttcgttctttgccgtgaatgctgcaacgat
ccccagcttcacctctactcccttgatctcgcacatcgtcaattgatcgttcagcagact
caaatgcttgaatggttggtcagaccaccatcacacgccgaatccaaggacggattcaga
ttctgtgatatcactccaaccgatatggatcttctcgaagaaacatggccaaagaatccg
aacgcaacaatccttgatttgccacagatcagaaagagcacaaccattcctaagacgaag
cccacatacaaagatatccgtgactacgcgaccacttacaacactcttgttaagctagaa
atggattatgataaacaagtcacagaatcaatgatctacaggaatgtgaagatcaatttc
aagagagaaggctataaccgctttacaggaacctttagcttcccaatttcggaaacatct
cgaccaatcaatatcggagatacttttcttgtcaaatgcggtgcatacgaagccaaaggc
tctcttgagcgtactctcggcgttggcgagatcgaacttcttttcatccgccagcctact
ccaccagaagatgcaatcttcaccgtccaacttgtttggctcgacacttcctttgtcaga
atgattggcgccattgccaagatgccacaatccccacagacatcaaccgccaacataatc
aaggaagttatcatgggccatttaccagatacgattccaactcttcctggcgaaccaaat
cgcagtccagttgtcaaaggaattccaacactcaacctttcccaagtcaacgctgtttca
tacgccctcaaatctccattctgcatgatacaaggtccgccaggtacaggcaagacaaca
acaattgccgctttagttacaagattccttcaagcaaaagccggtccagttcttgtctgt
gcaccatccaatgcagctgttgagcgtgttacagaagcaattgcatctacacatgcatct
gtttgccgtgttatttcaacatcgcgtacagacatcgaagcaattgatgacaaatacgct
ctccacaacatggtttattcacttgattgcgctgaatcaaggagattgaatgacatgttg
attgagagatcgaacagagatttctctgaagacgaagagaagaaattcaaagatctccgc
aagagtttggagaacagagttattgatgcagcagatgtcatcacatgcacatgcattaca
tcagctgatccaagacttgcaacaaaagtattcccaacagtcatcatcgatgaagcaacg
caagctgtagaaccagaaattttaatccctataatgcacggatcgaaacaagtctgtttg
gtcggtgatcacatgcagcttggccctgttgtaacaaatccaaagtgtgttgaagcggga
ttgggcaattccattgtccagagattagtacagcttggattgagaccacagagacttctc
acacagtatagaatgcatcctgttctttccgaattcccttcaaacacattctacgatgga
gagttgatgaacggaattcctgcagagaagagaactcctcaacaaccagtcttcaactgg
ccgaaaccaagcttcccactcatgttctacaacaacgtgaacaatgaagaagaaatctct
aactctggtacttcatacatcaacgctttcgaagcaacaattgtttcccagattgttaca
caactctgcaaagcaggtgttgatccacaacaaatcggtatcatctctccttactccggc
caaaagttctatctccagaatttcttggcttcaatggctacattgccaagctctttctac
cagagactcgcaatcgcatcagtcgattccttccagggtggtgagaaagattacatcatc
atgtcctgcgtcagatgcaatccacacggatcaatcggtttcctcaaggattacagaaga
ttgaatgtcgctttgacaagagctaagtacggattgatcatcgttggatgcgcaagagtt
ctctcaaagtcaatcctctggtacaatttgctcagacactgccaggaacagcacgttctc
gtggaaggttcaatcatggatttgaaggaatctccttgcgttttacaaaaaccgtctgtc
aaacagtcagaaatattcccaggaattcctgtcggcgaattcggtaaggatatggttcca
aacactgtcgaaagcaatttcgataatgatgataatgatggtgaagcttatttcaacact
gtttcttaa
DBGET
integrated database retrieval system
