KEGG   Trichomonas vaginalis: 4775583
Entry
4775583           CDS       T01022                                 
Symbol
TVAGG3_0552420
Name
(RefSeq) RNA-binding protein family
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
tva  Trichomonas vaginalis
Pathway
tva03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tva00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4775583 (TVAGG3_0552420)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tva03041]
    4775583 (TVAGG3_0552420)
Spliceosome [BR:tva03041]
 Complex A
  U2 snRNP components
   U2 related factors
    4775583 (TVAGG3_0552420)
 Complex B
    4775583 (TVAGG3_0552420)
SSDB
Motif
Pfam: RRM_1 RRM_MUD2_C RRM_3 DUF5864 FakA-like_M
Other DBs
NCBI-GeneID: 4775583
NCBI-ProteinID: XP_001329701
UniProt: A2DPX0
LinkDB
Position
II:complement(<15896999..>15898233)
AA seq 400 aa
MNDIAYKANTFLRGGWFTSPEEYESMGYTLGMPPGYYAPNHPEIDKLVERIKPFGGIIFP
NSMSTKEDPNSKRKVMVLNLPPEMTPQTLNNYITQNLLKRKLITDPNPIDFIDWLPDQFG
GYVTFKSQKDAEAAVSIGKSLVYNQREIHIIWPYSLQTEEFSTIEINENQTKNTIYVEFH
NEQPNEQKIYQIFEPKYQVSKTFISPGSNYAIVTLSHDEITDMTVFDLQATCGDDVSIRT
TFEPPSIDPRTPSDQKLRQTQLYEGPTKLVSVVAPNLLNNPCIADILNSEMTVSSLIQQE
TEENQIGDETVLCLYNIAKDYILMDPELTNEFLSDITEECQKYGTILDYKIDPMEHQNDY
GVVKIRYKTPEEAKRAQLNLAGRRYEGRLVITSVEAAEQI
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgaatgatatagcttataaggcaaatacattcttgagaggaggctggtttacttcacca
gaagaatacgagtcaatgggatatactcttggtatgcctcctggctattacgctccaaat
catcctgaaattgataaattagttgaaagaattaaaccatttggcggaataatatttcca
aattcaatgtccaccaaagaagatccaaactcaaagagaaaagttatggttttaaacctt
cctccagaaatgacaccacaaacacttaacaattatatcactcagaatctcctcaagaga
aaacttattactgatccaaatcctattgatttcattgattggttgccagatcaatttggt
ggatacgtcacttttaagagccaaaaggatgctgaagccgcagtttctataggaaaatcc
ctcgtatacaaccaacgtgaaatccatatcatttggccttattccttgcaaacagaagaa
ttttcaacaattgaaatcaacgaaaaccaaacgaagaatacaatttacgttgaatttcat
aacgaacaaccaaatgagcaaaagatttaccagatatttgagccgaaataccaagttagc
aaaacttttatatctcctggttcaaattacgctattgtaacactttcccatgatgaaatt
accgatatgacagtttttgaccttcaagctacatgcggagatgatgtttcaatcagaact
acattcgaaccaccttctattgaccccagaacaccatcagatcaaaaattacgccagaca
caactatacgagggtcctaccaagttagtttccgttgttgctccaaatcttttgaataat
ccttgtattgctgacattttgaactcagaaatgactgtttcatcgctcattcagcaagag
acagaggaaaaccagattggagacgaaacagtcctttgtttatacaacattgcaaaagat
tatattttaatggacccagaattgacaaatgaattcctcagcgacataacagaagagtgc
cagaagtacggaactatcttagactacaaaattgacccaatggaacatcaaaacgactac
ggtgttgtaaaaatcagatacaaaacaccagaagaagcaaaaagagctcaattaaatttg
gcaggtagaagatacgagggaagacttgttatcacctctgttgaagcagcagaacaaatt
taa

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