KEGG   Trichomonas vaginalis: 5463439
Entry
5463439           CDS       T01022                                 
Symbol
TVAGG3_0289110
Name
(RefSeq) transcription initiation from RNA polymerase II promoter
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
tva  Trichomonas vaginalis
Pathway
tva03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tva00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    5463439 (TVAGG3_0289110)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tva03021]
    5463439 (TVAGG3_0289110)
   03036 Chromosome and associated proteins [BR:tva03036]
    5463439 (TVAGG3_0289110)
Transcription machinery [BR:tva03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     5463439 (TVAGG3_0289110)
   Coactivators
    SAGA/TFTC/STAGA complex
     5463439 (TVAGG3_0289110)
Chromosome and associated proteins [BR:tva03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     5463439 (TVAGG3_0289110)
    STAGA complex
     5463439 (TVAGG3_0289110)
    TFTC complex
     5463439 (TVAGG3_0289110)
    SAGA complex
     5463439 (TVAGG3_0289110)
    SLIK complex
     5463439 (TVAGG3_0289110)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta EIF3I WDR55 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_EML TFIID_NTD2 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_HPS5 RMC1_N NBCH_WD40
Other DBs
NCBI-GeneID: 5463439
NCBI-ProteinID: XP_001578922
UniProt: A2DNU1
LinkDB
Position
V:<6483143..>6484764
AA seq 479 aa
MDYSYMVKNPSDFGYPPNTIPRGITLDDLMKSNQFLKSFPKTFSIANPSPNALTESKKYK
KLLDFVNVHKDKPNLQQLLVPVFCTSVMALKEKGNVDELNAFVEDFKDQIPNSRQPAVNR
FLKDEKVFTHNACLFSTQNMNIEVTYEEAELIKNFINIQENSDLRRQITSHVELIPKYEV
VPSHTIDMKFSPPSVIKDITILQTTIPNATQAVVSDYSTDVFAAFGNNQVMRFNGKERSS
QILRNHSSSVTSLSLSSTGSLLLSTDIEGNYSVWSQNGSENGYLTMSSIWCSCFAPQGGI
FGIGSDQCAFLYDASRNKMFRSLVGHLNSISSIKFHPNCALVGTTSSDGTARIWDVRTGM
TQRLFLNKDQIEIPRRFTNIAFSDNGQFVAYYNGNVCVANIGSNAIIADQPVGIQKIKSI
QFSQDSNSVFIVETNGEIQVLTFNSGDLVLKDVMNLSANVIDAKRNTMNELNVLVSYDL
NT seq 1440 nt   +upstreamnt  +downstreamnt
atggattattcctatatggttaaaaatccaagcgactttggctatccaccgaacacaatt
cccagaggaataactttggatgatttaatgaaatctaatcaatttcttaagtcttttcca
aaaactttttctattgccaatcctagtccaaatgcattaacagagtcaaagaaatataag
aaattactcgattttgttaatgtgcataaagacaaaccaaatcttcaacaacttttagtt
ccagttttttgtacatcagttatggcattaaaagagaaaggaaatgttgacgaacttaac
gcatttgttgaagacttcaaagatcaaataccaaattcacgacaaccagctgttaataga
tttttaaaggatgaaaaagtatttacacataatgcatgcctattttcaacacagaatatg
aatatagaagttacctatgaagaagcagagttaattaaaaactttatcaatattcaagaa
aattccgacttaagaagacaaattacatctcatgtagagcttattcctaagtatgaagtt
gttcctagccatacaattgacatgaaattctctcctccttcagtaattaaagatatcaca
attttacaaacaactattccaaatgcaacacaagctgttgtttctgattactcaacagat
gtttttgcagcatttggaaataatcaagtcatgagattcaacggaaaagaaagatcatct
caaattttacgaaatcattcatcatcagttacctcattatcactttcttctaccggatct
ctacttctttccaccgatatcgaaggaaattacagcgtttggagccaaaatggctctgaa
aatggttatttaacaatgtcaagtatctggtgttcatgttttgcacctcaaggaggcatt
ttcggtatcggaagtgatcaatgcgcatttctatacgatgctagtcgcaataaaatgttc
agatccttagttggccacttgaattcgatttcatccataaaattccacccgaattgcgca
ttagtcggcactacttcgtctgatggaacagcaaggatatgggatgtgaggacaggaatg
actcaaaggctgtttttgaacaaagatcaaatcgaaatcccgagaaggttcacgaatatt
gcgttttctgataatggacagttcgtcgcttactacaatggtaatgtttgcgttgcaaat
atcggctcaaacgcaattatcgccgatcaacctgtaggaatccagaaaattaagtcaatt
cagttcagccaggactcaaattctgtcttcatcgtagaaacaaatggagaaatccaagtt
ttgacttttaattctggagatcttgttttaaaggatgttatgaacctttctgctaatgtc
attgacgcaaagaggaacactatgaacgaacttaatgttttagtatcttatgacttgtaa

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