Trichomonas vaginalis: 5464153
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Entry
5464153 CDS
T01022
Symbol
TVAGG3_0580360
Name
(RefSeq) RNA-binding protein family
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
tva
Trichomonas vaginalis
Pathway
tva03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
5464153 (TVAGG3_0580360)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tva03041
]
5464153 (TVAGG3_0580360)
Spliceosome [BR:
tva03041
]
Complex A
U2 snRNP components
U2 related factors
5464153 (TVAGG3_0580360)
Complex B
5464153 (TVAGG3_0580360)
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Ortholog
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Motif
Pfam:
RRM_1
RRM_occluded
RRM_PARP14_3
RRM_MUD2_C
PIP49_N
Motif
Other DBs
NCBI-GeneID:
5464153
NCBI-ProteinID:
XP_001579629
UniProt:
A2DLL0
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All DBs
Position
II:complement(<20734384..>20735660)
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AA seq
397 aa
AA seq
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MYDQSFQNPPHLRGGWFVGPEEYEQMGYTLGLPPGIKMPLKPEILELVEKIKKTNGIAIP
SHIPINQELIKRKIMATNIPTGTSVEDFKNLIVSTLLKRKLITDTDPIENIEYMTQKFTA
IIEFKSHKDAEACMLLEKTLIINNYTINLFWYNEGNLNVASELQLSESKYSNPIYVQIPS
TTIQEDNIRALFEPEFPIKEVIIQQETDYAFVELNDPYKAHLAAYTVNGKQVEDKTVTAR
VCYNENPDDLDISQNELIRNQIADGGQNYYSVINRKLLENPNLIDILNTNINPSVVITPD
VEKLQPESGTFLYIYNIAKSVIVFEHDLIEELIIDIQQECSKFGNVLDVEVEQLPIRSDY
AVIKVKFSTPSEAKAAQLALSGRRYGGRVVITSVEDK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatcaatcttttcaaaatccaccacatttaagaggtggctggtttgttggacca
gaagaatatgaacagatgggttatacattaggacttcctccaggaatcaaaatgccctta
aaacccgaaattttagagttagtcgaaaaaatcaagaaaacaaatggaattgcaattcca
tctcatataccaataaaccaagaactaataaaaagaaagatcatggcaacaaatattcca
acaggaacttctgttgaagatttcaaaaatttaatcgtctctactttattaaaacgtaag
ttaatcacagatacagatccaatagaaaatatcgagtacatgactcaaaaattcaccgca
attatcgaatttaaatcacataaagatgcagaagcttgcatgttacttgaaaaaacactc
attatcaacaattacacaattaacttgttttggtataatgaaggcaatctcaatgttgct
tcagaacttcaattaagcgaatctaaatattctaatccgatttacgttcaaattccatcc
acaacaatacaagaagataatataagagctttatttgaaccggaattcccaattaaagaa
gtaattatacagcaagaaacagattatgcttttgttgagctaaatgatccatataaagca
catttggcagcatacacagtcaatggaaaacaagttgaagataaaactgtcactgcaaga
gtttgttacaatgaaaatccagatgatttagatatatctcaaaatgaactcatcagaaac
caaattgcagacggtggacaaaattactattcagtaattaacaggaaactactagaaaat
ccaaatttgattgatatattaaatacgaatattaatccttcagttgtaatcactccagat
gttgaaaaactacaaccagagtcaggcacattcttatacatctataatattgctaaatca
gtcattgtttttgaacatgatttgattgaagaacttattatagatattcaacaagaatgt
tcaaagtttggcaatgtactcgatgtagaagttgaacagttaccaattagatccgattac
gccgtgattaaagttaaattttcaactccatcagaagcgaaagccgcacaacttgctttg
tctggccgcagatacggaggaagagttgttataacttctgttgaagataaatga
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