KEGG   Trichomonas vaginalis: 5464153
Entry
5464153           CDS       T01022                                 
Symbol
TVAGG3_0580360
Name
(RefSeq) RNA-binding protein family
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
tva  Trichomonas vaginalis
Pathway
tva03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tva00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    5464153 (TVAGG3_0580360)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tva03041]
    5464153 (TVAGG3_0580360)
Spliceosome [BR:tva03041]
 Complex A
  U2 snRNP components
   U2 related factors
    5464153 (TVAGG3_0580360)
 Complex B
    5464153 (TVAGG3_0580360)
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_PARP14_3 RRM_MUD2_C PIP49_N
Other DBs
NCBI-GeneID: 5464153
NCBI-ProteinID: XP_001579629
UniProt: A2DLL0
LinkDB
Position
II:complement(<20734384..>20735660)
AA seq 397 aa
MYDQSFQNPPHLRGGWFVGPEEYEQMGYTLGLPPGIKMPLKPEILELVEKIKKTNGIAIP
SHIPINQELIKRKIMATNIPTGTSVEDFKNLIVSTLLKRKLITDTDPIENIEYMTQKFTA
IIEFKSHKDAEACMLLEKTLIINNYTINLFWYNEGNLNVASELQLSESKYSNPIYVQIPS
TTIQEDNIRALFEPEFPIKEVIIQQETDYAFVELNDPYKAHLAAYTVNGKQVEDKTVTAR
VCYNENPDDLDISQNELIRNQIADGGQNYYSVINRKLLENPNLIDILNTNINPSVVITPD
VEKLQPESGTFLYIYNIAKSVIVFEHDLIEELIIDIQQECSKFGNVLDVEVEQLPIRSDY
AVIKVKFSTPSEAKAAQLALSGRRYGGRVVITSVEDK
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgtatgatcaatcttttcaaaatccaccacatttaagaggtggctggtttgttggacca
gaagaatatgaacagatgggttatacattaggacttcctccaggaatcaaaatgccctta
aaacccgaaattttagagttagtcgaaaaaatcaagaaaacaaatggaattgcaattcca
tctcatataccaataaaccaagaactaataaaaagaaagatcatggcaacaaatattcca
acaggaacttctgttgaagatttcaaaaatttaatcgtctctactttattaaaacgtaag
ttaatcacagatacagatccaatagaaaatatcgagtacatgactcaaaaattcaccgca
attatcgaatttaaatcacataaagatgcagaagcttgcatgttacttgaaaaaacactc
attatcaacaattacacaattaacttgttttggtataatgaaggcaatctcaatgttgct
tcagaacttcaattaagcgaatctaaatattctaatccgatttacgttcaaattccatcc
acaacaatacaagaagataatataagagctttatttgaaccggaattcccaattaaagaa
gtaattatacagcaagaaacagattatgcttttgttgagctaaatgatccatataaagca
catttggcagcatacacagtcaatggaaaacaagttgaagataaaactgtcactgcaaga
gtttgttacaatgaaaatccagatgatttagatatatctcaaaatgaactcatcagaaac
caaattgcagacggtggacaaaattactattcagtaattaacaggaaactactagaaaat
ccaaatttgattgatatattaaatacgaatattaatccttcagttgtaatcactccagat
gttgaaaaactacaaccagagtcaggcacattcttatacatctataatattgctaaatca
gtcattgtttttgaacatgatttgattgaagaacttattatagatattcaacaagaatgt
tcaaagtttggcaatgtactcgatgtagaagttgaacagttaccaattagatccgattac
gccgtgattaaagttaaattttcaactccatcagaagcgaaagccgcacaacttgctttg
tctggccgcagatacggaggaagagttgttataacttctgttgaagataaatga

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