Trichomonas vaginalis: 5464712
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Entry
5464712 CDS
T01022
Symbol
TVAGG3_0169420
Name
(RefSeq) ATP-dependent RNA helicase family
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
tva
Trichomonas vaginalis
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tva03009
]
5464712 (TVAGG3_0169420)
Enzymes [BR:
tva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
5464712 (TVAGG3_0169420)
Ribosome biogenesis [BR:
tva03009
]
Eukaryotic type
90S particles
Helicases
5464712 (TVAGG3_0169420)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_C
OB_NTP_bind
DHX37_C
AAA_19
HA2_N
ATPase
AAA_11
AAA_22
nSTAND3
NACHT
TsaE
Motif
Other DBs
NCBI-GeneID:
5464712
NCBI-ProteinID:
XP_001580173
UniProt:
A2DK16
LinkDB
All DBs
Position
IV:25943096..25946389
Genome browser
AA seq
1097 aa
AA seq
DB search
MSNIISEELKKELGEGDDIVIDPEAGPKEQQEQKLNKHQLRKQRNQERKIKSASNSSEKA
KIKKEKIRLLQEKRARVGEVIANFKQNAVSKQTKEIMATSSSIGVKKTENQLYKEALHLR
ELNLPYDKEIIEKIEKKKKEKADRIAAMPAFVPIQKSEEEIPNREEPVTTEKIQQKQAAV
FKPLIPPSRPELEKRDMPSKITIRDGKQETVHLDRPQDVIEVRKKLPIIGQETEILESIR
ENDIIIIQGDTGSGKTTQVPQFLYEAGYGTFRAKGKIVVTEPRRVAAINMSKRVAYEMGF
RHGAEVGFQIRDQHLLTDATTIKFVTDGVLLKELESDLFLSSYSVVIIDEAHERTVNTDV
LIGLLSKIVKTRRERSEKDSSIEPLKLIIMSATLRSEDFTKNEKLFEVPPKEIKVPGRMY
PVTDQYPKDTPAPENVNKCIKNLVDHLHETLPDGSILVFVPGKSDINELVGYFRSLPTVD
PSKSNKDKPKDEQKVTKGTSSKPETEKPKEQKQETEENVDEDDENEIFIDDSGKRHRKLK
PIENFEDMMYGNLPPVTSRKPMLVLPLYSLLDPYEQEKVFKDPPKDKRVIIFSTNVAETS
LTIPGVRYVVDSGLEKVRVYDFSKQNVNAKVQYISKASAKQRKGRAGRTSPGYCFRLYSQ
AYKHNAFEKYSPPEILKRPITEVVLLLKSMGLNDISKFPFPTQINEENIKQSELILQHLG
AIETETPRKITQLGRIMVGYPLDPRLSKILIMAKANGLLDYAAVIVGVLSVREPFESNSN
EKSDNALDVDADNSDILYAMKMFCAWQYEQPEERQKFCLDNNLRPKAMEEIQNIRFQLKK
LLVKNKIDICITSLEPTDSKQANKLRQAILCGYPDHVAHQVKGNEYVLLDGTKSFLPGNS
QLIESPPKYVVYIDNVSSDGRNRLQNPSQIAPQWLMLVGSPLFLVKTNQQTPYYDPLSDR
VVCKTEGEYKNSEIDASMAAQVGKWNIPATPCEVQENKYMYFAQGFLKGDVFEEIKQLHK
GMSMTMINNYTAPNNNKIPQKHLAIASVLKSKDISTKAQLIKELKQNPTFLLNQFMYWLE
EEEYKPQAVNLWKKFTK
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatattatcagtgaagaactcaagaaagaacttggagaaggcgatgatattgtc
attgatcctgaggctggtccaaaagagcaacaagaacagaaattaaataagcatcagctc
agaaaacaacgaaatcaagaacgaaaaatcaaatctgcatcaaatagcagtgaaaaagca
aaaataaagaaagagaagataagacttttacaagaaaaacgtgcaagagtcggtgaagtt
attgcaaatttcaaacaaaacgccgtatccaaacaaacaaaggagattatggctacatca
tccagcattggtgtaaaaaagacagaaaatcagctttacaaggaagcattacatctaaga
gaattgaatttaccttacgacaaagaaattatcgaaaaaatcgaaaagaagaagaaagaa
aaggccgacagaattgcagcaatgccagcatttgttccaattcaaaaatccgaagaagaa
attccaaatcgcgaagaaccagttacaacagagaagattcagcaaaagcaagccgcagtt
ttcaagccacttataccaccatcaagaccagaactcgagaaacgcgatatgccaagcaaa
attacaattcgtgatggaaaacaagaaacagtccatcttgatcgtccacaagacgtcata
gaagttagaaagaagcttcctatcataggccaagaaacagaaatcctcgaatcaatacgt
gaaaatgatataattattattcaaggtgatacaggttcaggtaagaccacacaagtccca
caattcctttacgaagcaggatacggcaccttccgtgcgaaaggaaagattgttgtcaca
gaaccgagaagagttgctgcaattaacatgtctaagcgtgttgcctacgaaatgggcttc
agacatggtgcagaagtcggtttccagattcgtgaccaacatttactcacagatgcaaca
acaattaaatttgtgacagatggtgtattgttaaaggagttagaatcagatttattcttg
tcctcatactcagtagtaattattgatgaagctcacgaaagaacagttaacacagatgtt
ttaattggattattatccaagattgtaaagacaagaagagaaagatcagagaaggattca
tccattgagcctcttaagctgattattatgtctgctacattaaggtcagaagatttcact
aagaacgaaaaattatttgaagttccacctaaagaaatcaaagttccaggtagaatgtat
cctgttacagaccaatatcctaaagatacacctgctcctgaaaacgttaacaaatgtatc
aagaatttggttgatcatctccatgaaacacttcctgatggttcaatcttagttttcgtt
ccaggaaaaagcgatatcaacgaacttgttggctatttcagatcattaccaacagtagat
ccttcaaagtcaaacaaagataaaccaaaggacgaacaaaaagtgacaaagggaacttcc
tccaaaccagagaccgaaaaaccaaaagaacaaaagcaagaaacagaagagaacgttgac
gaagacgatgagaatgaaatctttattgatgacagtggaaagagacacagaaaactcaaa
ccaatcgaaaactttgaagacatgatgtatggaaaccttccacctgttacaagtcgcaag
ccaatgttagtattacctttgtattcattgctcgatccatacgaacaagaaaaagtcttc
aaagatccaccaaaagacaagagagtcatcattttctcaacaaacgttgcagaaacatct
cttacaattccaggagtaagatatgttgttgattcaggtctcgagaaagtcagagtctat
gatttctccaaacaaaacgtcaacgcaaaagtccaatacatttccaaggcttctgcgaag
cagaggaaaggaagagcaggcagaacatcacctggctattgcttcagactctattcacaa
gcctacaaacacaacgctttcgagaaatactctcctccagagatattaaagcgaccaatt
acagaagtagttctacttctcaagtcaatgggattaaacgacatttctaagtttccattt
cccactcaaatcaacgaagaaaacatcaaacagagtgaactgattttgcaacatctcgga
gcaattgaaacagaaactcctcgcaaaatcacacagttaggaagaataatggttggttat
ccattggatccaagactctctaagatcttgatcatggcaaaagcaaacggtctcttggat
tacgcagctgtaattgtcggagttctttctgtaagagaaccatttgaaagtaattcaaat
gaaaaaagtgacaatgctttagatgttgatgcagacaattcagatatattgtatgccatg
aagatgttttgtgcatggcaatacgaacaacctgaagagcgtcagaagttctgtttggat
aacaatctcagaccgaaagccatggaagaaatacaaaatatcagattccaactcaaaaaa
ttacttgtcaaaaataaaattgacatttgcatcacgagtttggagccaacagactctaaa
caagcgaacaaactacgccaggcaattctctgtggatatccagaccacgtagctcatcaa
gtaaaaggaaatgaatatgttttacttgatggaacaaaatcatttttaccaggaaattca
caactcattgaaagtccaccgaaatacgttgtctacatagataatgtaagtagtgatgga
aggaacagattacagaatccatcacaaatcgctccacaatggctgatgttagttggttct
cctcttttcttagttaaaactaaccaacaaactccttattacgatcccttgtctgataga
gttgtttgcaagacagaaggtgaatacaaaaacagcgaaatcgatgcatcaatggctgca
caagttggtaaatggaatatccctgctactccttgcgaagtacaagaaaacaaatacatg
tatttcgctcaaggtttcttgaaaggtgacgtttttgaagaaattaaacagttacataaa
ggaatgagtatgacaatgatcaacaattacaccgcacctaacaataacaagatacctcag
aaacaccttgcaattgcttctgttcttaaatcaaaggatatttcaacaaaagctcaatta
atcaaagaattaaaacaaaatccaacatttttgttgaaccagttcatgtattggctcgaa
gaagaagaatacaagccacaagctgttaacttatggaagaaattcacaaaataa
DBGET
integrated database retrieval system
