Trichomonas vaginalis: 5465362
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Entry
5465362 CDS
T01022
Symbol
TVAGG3_0602890
Name
(RefSeq) histone deacetylase class I, eukaryotic type family
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
tva
Trichomonas vaginalis
Pathway
tva03082
ATP-dependent chromatin remodeling
tva03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
5465362 (TVAGG3_0602890)
03083 Polycomb repressive complex
5465362 (TVAGG3_0602890)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tva03036
]
5465362 (TVAGG3_0602890)
Enzymes [BR:
tva01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
5465362 (TVAGG3_0602890)
Chromosome and associated proteins [BR:
tva03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
5465362 (TVAGG3_0602890)
HDAC complexes
Sin3A-HDAC complex
5465362 (TVAGG3_0602890)
BRAF-HDAC complex
5465362 (TVAGG3_0602890)
REST complex
5465362 (TVAGG3_0602890)
SHIP complex
5465362 (TVAGG3_0602890)
MiDAC complex
5465362 (TVAGG3_0602890)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
5465362 (TVAGG3_0602890)
Heterochromatin formation proteins
Other heterochromatin formation proteins
5465362 (TVAGG3_0602890)
Chromatin remodeling factors
NuRD complex
5465362 (TVAGG3_0602890)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
5465362
NCBI-ProteinID:
XP_001580818
UniProt:
A2DIM8
LinkDB
All DBs
Position
II:<24539372..>24540708
Genome browser
AA seq
425 aa
AA seq
DB search
MSKHRISYFYDEEIGNFYYDEGHPMKPIRVRMTHELVLAYGLHEHLEIFRPRHATPQEMM
KFHSLDYINFLRTTNPHNVSSHPVSELKRFNIGDDCPIFENIFEYCQISAGGSICAAQRL
NSGLCHIAINWAGGLHHAAKDHPSGFCYIADCVLGIIELLKYHPRVMYIDIDIHHGDGVE
EAFYNSDRVLTCSFHKFSRDFFPGTGHIYDVGIDVGKYYAVNVPLQDGITDSAYEKIFKP
IIKHLIEWFRPGAILLQCGADSLVGDRLGFFNLSTKGHGECVSYVKSFGIPLLVCGGGGY
TKESVARCWAYETSLLCGVDVGNNLPETDYSPFLVKQCPNLHLTPDPRMRNKNSDEYLDG
IYKIIVENLRHLPGAPSVQMQELPPRAAVLKPQKVSTAPKKFSELLCQKLNLNDENDDEE
EEEYV
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacatagaatttcctatttttatgatgaagaaataggaaatttttattatgac
gaaggacacccaatgaagccaattcgagttcgtatgacacacgaacttgttctcgcttac
ggattacatgaacacttagaaatttttcgaccaaggcacgccacaccacaagaaatgatg
aaatttcattctctagactatatcaactttttaagaacaacaaatccgcataatgtttca
tctcatccagtaagtgaattaaaaagattcaatataggagacgattgtccgattttcgag
aacatttttgaatactgtcaaatatctgctggtggaagtatctgcgccgcccaaagatta
aattccggattatgccatatcgcaatcaattgggcaggtggtctccatcatgctgcgaaa
gatcatcctagtggattttgctatatcgcagattgcgttctaggaattatcgaattatta
aaatatcatccacgcgtaatgtacattgatatcgatatacatcacggagatggtgttgaa
gaagcattttacaactcagatcgcgttcttacatgctctttccataaattttcgagagat
tttttcccaggcactggccacatttatgatgttggcattgatgttggaaaatactacgca
gttaatgtccctctacaagatggaataactgattcagcttacgagaaaattttcaaaccg
ataattaaacatttaatcgaatggttcaggccaggagccattttactacaatgtggagcc
gattctctcgttggagatcgtcttggcttcttcaatctttcaacaaaaggccatggagaa
tgtgtatcttacgtaaaatcgtttggaatacctcttttggtttgtggaggtggtggatac
actaaggaatctgttgcaagatgttgggcatacgaaacatcccttctttgtggtgttgac
gtcggaaataatcttcctgaaacagattacagtccattcttagtcaaacagtgtccaaac
ctccatttaacacctgatccaagaatgaggaacaagaattccgatgaatacttggatgga
atctacaaaataattgttgagaacttgagacaccttcctggagctccttcagtacaaatg
caggaacttcctccaagagctgctgttctaaagccacaaaaggtgtcaacagctccaaaa
aagttttctgagctgctctgccagaaattgaacttaaatgacgaaaatgatgatgaagaa
gaggaagaatacgtttaa
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