Trichomonas vaginalis: 5465701
Help
Entry
5465701 CDS
T01022
Symbol
TVAGG3_0677490
Name
(RefSeq) DNA clamp loader protein
KO
K10754
replication factor C subunit 1
Organism
tva
Trichomonas vaginalis
Pathway
tva03030
DNA replication
tva03410
Base excision repair
tva03420
Nucleotide excision repair
tva03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
5465701 (TVAGG3_0677490)
03410 Base excision repair
5465701 (TVAGG3_0677490)
03420 Nucleotide excision repair
5465701 (TVAGG3_0677490)
03430 Mismatch repair
5465701 (TVAGG3_0677490)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tva03032
]
5465701 (TVAGG3_0677490)
03400 DNA repair and recombination proteins [BR:
tva03400
]
5465701 (TVAGG3_0677490)
DNA replication proteins [BR:
tva03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
5465701 (TVAGG3_0677490)
DNA repair and recombination proteins [BR:
tva03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
5465701 (TVAGG3_0677490)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
BRCT
RCF1-5-like_lid
RFC1
AAA_assoc_2
AAA_14
RuvB_N
RNA_helicase
AAA_22
BRCT_2
AAA_23
Viral_helicase1
ParA
AAA_16
NPHP3_N
AAA_5
DNAX_ATPase_lid
NACHT
Bro-N
AAA_18
AAA_7
ABC_tran
Motif
Other DBs
NCBI-GeneID:
5465701
NCBI-ProteinID:
XP_001581151
UniProt:
A2DH92
LinkDB
All DBs
Position
III:10532916..10535030
Genome browser
AA seq
687 aa
AA seq
DB search
MPPKVAKVDLRPFPKRDENFTINAGFQYGKGDNPPLYGQKVIPVGKPNCLLGNTFVPTGT
MVSLKREQVKDLITKYGGKVTSSISGKTDCVVVGCIEVGPKKIQTCREKNIPTIDEDGLF
YLIARSDPEKNKDFIKKFENQQAGVIEEIEEKKEAQEEIKHEETIKENIKEKKEQNKKYL
NFAEKYRPSDLKDFIGAVGAKNQLREYLSKFPNVKNKIALISGDQGCGKTTLAHLMASSL
GFHCNELNASDVRTKGEIQNFLDVTTSGCIETSKKKGLGKECLIFDEIDGMGAGDRGGIS
AIASLAKTTKIPIICITTGKSDKKFDPLLKICESINIPKIERGLMCNKLITVAKSEGINI
SQKSIQSIAERANGDLRYALNSLEFWSASDNGFEKAKSVDNAVDGTRFILSMHTSFEDKF
NCAFADDAMPLYVQYNLHAPQGNRESALDYADALDATCFGEIVERELKETQNYSLSTPSN
YLSCVLPTMISKNKMEPKLLSAQMPKIMMTYSKKSKLERIKQDIASSFKINDSDVYSTAQ
NAMMRIGELSKNEKYDLASKFMFDSNISLENVEDFNEFINIGKKNDFKLQKDLKKSYLAQ
HSEYDPLIVQTHGKKVKLEESKKKEKDEDGESKKKHKDEKKEKKSKGEKKKDEKKKEKHE
KKHEKKEKDEKKHDKKEKDEKKKKDKK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaaaagtagctaaagttgatcttcgtccatttcctaaaagagatgaaaacttc
actattaatgcagggtttcaatatggtaaaggagataatcctccattatacggacaaaaa
gtcattccagtcggaaaaccaaattgtttactaggaaacacatttgttcctacaggaaca
atggtttcattgaagcgcgaacaagttaaagatcttattactaaatacggaggcaaagtc
acctcatcaatttcaggaaaaacagattgtgttgttgttggctgcatagaagtcggtcca
aagaaaatacagacttgcagagagaagaatatcccaacaattgatgaagatggcctcttt
tatttaattgcaagatcagatccagaaaagaacaaagatttcatcaagaaattcgagaac
cagcaagcaggtgttatcgaagagattgaagaaaagaaggaagctcaagaagaaatcaaa
catgaagaaacaatcaaagaaaatatcaaagaaaagaaggaacaaaacaagaaatacctt
aacttcgcagaaaaatacagaccatccgacctaaaggacttcataggagctgtcggagct
aagaatcaactcagagaatatttatctaaattcccgaacgtcaaaaacaaaattgctctt
atttcaggtgaccaaggatgtggaaagactacattggcgcacttaatggcctcttctctt
ggcttccattgcaatgaattgaacgcgtcagacgtaagaacaaaaggagagatccaaaac
ttcttagatgtcactaccagcggatgtatcgaaacatcaaagaagaaaggactcggaaaa
gaatgtttaatctttgatgaaatcgatggaatgggcgcaggcgatagaggaggcatttcc
gcgattgcttcattggcaaagaccacaaagataccaattatctgtataacaactggaaaa
tcagataaaaaatttgatcctttattaaaaatctgcgaatcgataaacattccgaagatc
gaacgcggattgatgtgtaacaaacttataactgttgcaaaatcggaaggaatcaacatt
tcccaaaaatcaattcaaagtatcgcggaaagagcgaacggagaccttagatacgccctg
aattcactggaattctggtcggcaagtgataatggcttcgagaaagccaaatcagtcgac
aacgccgttgatggaacaagatttattttatcaatgcacacttccttcgaagacaagttc
aattgtgcatttgccgatgatgccatgccactctacgtccaatacaacctccatgctcct
caagggaacagagaatcagcacttgattacgcagatgcgctcgatgcaacatgtttcgga
gagatcgttgaaagggaactcaaggagacacaaaactacagtctttcgaccccttctaat
tacctttcttgtgttttgccaacaatgatttccaaaaataagatggaaccgaaactttta
agtgcacagatgccaaagattatgatgacatactcaaagaagtcgaaactcgaaagaatc
aaacaagatatcgcttcatcatttaagataaacgatagcgatgtttattctacagcacag
aatgcgatgatgagaattggagagctttcaaagaacgaaaaatatgatttggcatcgaaa
tttatgtttgattcgaatatttctcttgaaaatgttgaagatttcaatgaatttatcaac
attggaaagaagaatgatttcaaactccagaaagatctgaagaagtcttatttggcccaa
cattccgaatatgatcctttaattgtccaaactcatggaaagaaagttaaactggaagag
agcaagaagaaagaaaaggatgaagatggtgaaagtaaaaagaaacataaagatgaaaag
aaagaaaagaaatctaaaggtgagaaaaagaaagatgaaaagaagaaagaaaaacatgaa
aagaaacatgagaagaaggaaaaggatgaaaagaaacatgataaaaaagaaaaagatgaa
aagaagaagaaagataaaaaatga
DBGET
integrated database retrieval system
