Trichomonas vaginalis: 5466712
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Entry
5466712 CDS
T01022
Symbol
TVAGG3_0577400
Name
(RefSeq) positive regulation of rRNA processing
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
tva
Trichomonas vaginalis
Pathway
tva03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
5466712 (TVAGG3_0577400)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tva01001
]
5466712 (TVAGG3_0577400)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tva03009
]
5466712 (TVAGG3_0577400)
Enzymes [BR:
tva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
5466712 (TVAGG3_0577400)
Protein kinases [BR:
tva01001
]
Serine/threonine kinases: Other
RIO family [OT]
5466712 (TVAGG3_0577400)
Ribosome biogenesis [BR:
tva03009
]
Eukaryotic type
Pre-40S particles
Kinases
5466712 (TVAGG3_0577400)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
Pkinase
CDC45
DUF3069
Motif
Other DBs
NCBI-GeneID:
5466712
NCBI-ProteinID:
XP_001582150
UniProt:
A2DEN7
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All DBs
Position
II:20225372..20226800
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AA seq
465 aa
AA seq
DB search
MSSDYSDDFDDNFDDINLDKADRASGEHIVPKMLEMYSHKLNFELQGNLYVDKTRDSIEQ
NDAKRKALRPGKDMRRTEEQVLDNRTKVVLFKLLNRKILGDIEGCISTGKEGNIYIGHRG
ESAPETWPEKFAIKIFKTCILKFKDRARYVTGEQRFQHHSKSKNSRKAVVLWSEKEFRNL
SRLHKNGVLCPEPLLVKHNIIFMELILNKNSPAPTLRLANLATKQFQDLYIDLAKTIRFM
YHTCELVHADLSEYNLLVKGTSLYIIDVGQAVEIDNPNANQFLRNDICVITSFFKSRGVK
TAPLKLLFDFIVDPKLYGSEDEVLRNIMDEKETITPQEFTQVYIPQRLDQVNDPEAEIAD
LEDGYYTNAQYHGAFTGIIPTYVAPDEIDLARMAEEEEEMEEEEEMEEEEEKGEKKETLD
RKNYTKAEWKEIQKKLKERRREKRLTKTPKYQKRKAYRKAHPNAK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggactatagtgatgattttgacgacaactttgatgatattaatttagacaag
gcagatagggcttcaggcgaacatattgttcctaaaatgcttgaaatgtattcccacaag
ctgaattttgaacttcaaggtaacttatacgtcgataaaacacgtgattcaattgagcag
aacgatgcaaaaagaaaggctttacgtccaggaaaggatatgagaagaactgaagaacaa
gttcttgataatcgtacaaaagttgttttattcaaactcttaaacagaaaaatcttaggt
gatattgaaggttgtatctctactggtaaagaaggcaacatttacatcggtcatcgtggc
gaatccgctcctgaaacatggccagaaaaatttgcaatcaaaatcttcaagacatgcatt
ctcaaattcaaagatcgtgctagatatgttacaggcgagcaaagattccagcaccactcc
aagtcaaagaactcaagaaaagctgttgttctgtggtcggaaaaagaattcagaaactta
agtcgtcttcacaagaacggtgttctttgccctgaaccacttcttgttaagcacaatatt
atcttcatggaactcattttgaacaaaaattctccagctccaaccttacgtcttgcaaat
cttgctacaaagcaattccaagacctctacatagatctggccaagactatccgcttcatg
taccatacctgcgagcttgttcatgcagatctttccgaatacaatctacttgtcaaagga
acaagtttatacatcatcgatgttggtcaggcagtcgaaatagacaaccccaatgccaac
caattcctcagaaacgatatctgcgtcattacaagtttcttcaaatctcgtggtgtaaaa
acagctccattaaagcttcttttcgacttcatcgtcgatccaaagctctacggaagcgaa
gatgaagtcctcaggaacatcatggatgagaaagaaacaattactccacaagaatttact
caagtttacattccacaaagacttgaccaagtaaatgacccagaagcagaaattgctgac
ttagaagatggctactacaccaatgctcaataccacggtgctttcactggcattattcct
acttacgtcgctccagatgaaattgatttggcaagaatggccgaagaagaagaggagatg
gaggaggaagaagaaatggaagaagaggaagagaaaggtgagaaaaaggaaactcttgac
cgaaagaattatacaaaagctgaatggaaggaaattcagaagaaacttaaagaacggaga
agagaaaagagattaacaaagactcctaagtaccagaagagaaaggcttatagaaaagct
catccaaatgccaaataa
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