Trichomonas vaginalis: 5466780
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Entry
5466780 CDS
T01022
Symbol
TVAGG3_0174140
Name
(RefSeq) pseudouridine synthase protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tva
Trichomonas vaginalis
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tva03016
]
5466780 (TVAGG3_0174140)
Enzymes [BR:
tva01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
5466780 (TVAGG3_0174140)
Transfer RNA biogenesis [BR:
tva03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
5466780 (TVAGG3_0174140)
Prokaryotic type
5466780 (TVAGG3_0174140)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
5466780
NCBI-ProteinID:
XP_001582234
UniProt:
A2DE30
LinkDB
All DBs
Position
IV:<26692786..>26693864
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AA seq
345 aa
AA seq
DB search
MGIFSSSPKYKKLDVPRSKYVFDLDEEIIILLYRYIGTQYHGLQQNIDTHTVEKELFQAL
ISAGFLSDQANCNLNRIKWSEASRTDAGVHACAQVLSFKASGLKGICIADIPDLINKQLP
RTSDIEIITCITLRRQFYAQKFAESRNYNFLLPTNAFSSNSIEHLNYLRTSILPLFIGWL
NYHNFTSNKSASNPSSMRKIDVFTFTDPFEVEGVEFVLFTIHGESFMLNQIRKMIATVIS
ASHNYIGAEEVKRCLSEEGWSIKMCPGDGLMLDHVDYIKCNKPSKKNPITFENDLQFTEF
QPEIQRWKKEVLFPHIAEIIKKKDLYHKWVIEYLPKYPWKPIAEQ
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggggattttttcttcatcgccaaaatataaaaagttagatgttcctcgatcaaaatat
gtttttgatttagacgaggaaataataattcttctttatcgttatattggtactcaatat
catggtttgcagcaaaatatagatacacatacagttgagaaagaattattccaagccctc
ataagtgcaggatttttgtctgaccaagctaattgtaaccttaacagaattaagtggagc
gaagcatccagaaccgatgcaggtgttcatgcatgtgcgcaagtattatcttttaaagca
tcaggtctcaaaggcatttgtattgctgatattcctgatttaatcaacaaacaacttcca
agaaccagtgacatcgaaattattacgtgtattacccttcgaagacaattttacgctcaa
aaatttgctgaatcaagaaattataactttttattacctacaaatgctttttcatccaat
tcaatagaacatttaaattatttaagaacttctatcctcccactattcattggttggcta
aattatcacaattttacatcgaacaaatcagcttctaacccttcatctatgagaaaaatt
gatgtttttacttttaccgatccatttgaagtagaaggagttgaatttgtattatttaca
atccatggtgagagttttatgcttaatcaaatccgaaaaatgattgcaacagtaatttct
gcatcgcataattatattggagctgaagaagtaaaaaggtgcctttctgaagaaggttgg
agtattaaaatgtgtcctggtgatggtttaatgcttgatcatgtagattacataaaatgc
aacaaaccatcaaagaaaaaccctataactttcgagaatgatctgcaatttactgaattc
caacctgaaattcaaagatggaagaaagaagttctgtttccccatattgcagaaataatt
aaaaagaaagatttatatcataaatgggttattgagtatttgccaaagtatccatggaaa
ccaattgcagaacaataa
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