Trichomonas vaginalis: 5467076
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Entry
5467076 CDS
T01022
Symbol
TVAGG3_0999190
Name
(RefSeq) DNA repair/RNA processing CPSF family
KO
K10610
DNA damage-binding protein 1
Organism
tva
Trichomonas vaginalis
Pathway
tva03420
Nucleotide excision repair
tva04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
5467076 (TVAGG3_0999190)
09124 Replication and repair
03420 Nucleotide excision repair
5467076 (TVAGG3_0999190)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tva04121
]
5467076 (TVAGG3_0999190)
03400 DNA repair and recombination proteins [BR:
tva03400
]
5467076 (TVAGG3_0999190)
Ubiquitin system [BR:
tva04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
5467076 (TVAGG3_0999190)
DNA repair and recombination proteins [BR:
tva03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
5467076 (TVAGG3_0999190)
TCR (transcription coupled repair) factors
Cul4-CSA complex
5467076 (TVAGG3_0999190)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_LRRK2
AP3D1
Motif
Other DBs
NCBI-GeneID:
5467076
NCBI-ProteinID:
XP_001582423
UniProt:
A2DDR1
LinkDB
All DBs
Position
I:<16942572..>16945734
Genome browser
AA seq
1038 aa
AA seq
DB search
MPKIGYALQSIVEEIPLAGAVKFRMNSNQSPVFVIPKRYSLEFYEIKSTGISPLYIIPFH
KTIYSLKVMPANYWGKPSTIDVLILFFNDSSFIIFNDPNKPIFKYNPKDIQNNFDYCIDI
HPRNAFIAFSHNTGLINFWDGSQPNRQEKVYKLPVSTDPLIDMKFLYTDEVMISTLHDMP
DNHKRVNTKILDLSLLFPNENPDLTFDIEDDDANLIIPLQKVSDDNPIFLVCGKLITVCS
NNSTFQVECPFKGNPSCFDYISQNLIVICDESGQIFLINIDTDVSVTFLGEVKTIPTSIV
YIDNGIFYIGSRVEDALFVKYHDDKLTVLTVSSQFRPSTFCSEFSDLCGSFFISHGTKNG
GGAITSVKTGLFYKEMFDAKMTDISTISKVDNNKFMMSTNNKISFVFDTDNQKILLKNNE
KTIDCFQTENGFIQVCSDKINIIDGYKITKTVNLSEILSMDSEQINVSKQAKKSSSKSDK
NKSKSKENLENESKSDNKFLEIVNYEEISSCAYDNKNKIIFIAVGDKIKVIDLSLKVTKS
FEFPEQIKSISYYKKLLAAITWSGFVSTIDDSNLCTLQKPHDFTPDKIFVLRSEANHRII
IVYMDGFAMITKKDLTIVKKTVFGHICCGSFMNDEKSVIILGSSPSLYFTDGNSMPLILS
NEDYFCGLRLSKEIIIMADQEKFVVGNLNESELCQINTTEFDVVPFLLTMLQKPPSLFIG
YFQEGIFGLMSLNLPSMKVEYDIKFENDMELSSLISLSNERICIGLTGKNEGKIQIIENV
FDNYTIVGNHSIEGGVFALSKFNENHLIVCGRCRLFFIEIQTSTAGAVTFNVLQAIQCPS
ICRSCFSMNEDIVILFDSFRSIISFKLNGNFLERVNEFPVNKNVVCGCIGDEIKPGVYDL
YSADDNGYLHVYKMNVDDCSMKEISNCKLSASVSCLSKVRENFVICTTRNGGVMMLTKVD
EKLQNSLEKARDVVFDLFRNDNDNDKYPIVDATNLQCLNCAPSKAVSSALEARNTTISEV
NFAVQQLKSYVAKICSTK
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaattggatatgctctgcaatcaatcgttgaagagattccgcttgcaggtgct
gttaaattccgaatgaactctaatcaatctcctgtgttcgtaattccaaaaagatactca
ttagagttttatgaaattaaaagcacaggcataagtccattatacatcattccttttcac
aaaacgatttattcactcaaagtaatgcctgctaactactggggaaagccatctaccatt
gatgttttaattttatttttcaatgattcatcatttattatctttaacgatccaaacaag
cctattttcaaatacaatcccaaagacatacagaacaactttgattattgcattgatatc
catccaagaaacgctttcattgctttttcacataacacaggcttaatcaacttttgggat
ggttcccaaccgaacaggcaggagaaagtctacaaactaccagttagtacagatccatta
atcgatatgaaatttttatatacagatgaagtcatgatttcgacacttcatgatatgcca
gataatcacaaacgagttaataccaagatcctcgatctatccttactctttcctaacgaa
aatccagatttgacatttgatattgaagatgacgatgcaaacctcattattcctctccaa
aaggtatcagatgataatcccatattcttagtttgtggaaaactgatcaccgtttgctca
aataactctactttccaagtagaatgccctttcaaaggaaatccttcttgttttgattat
atctctcaaaatttgatcgtcatttgcgatgaaagtggccagatctttctcatcaatata
gatactgatgtaagtgtcacttttctaggtgaagtgaagacgataccaacatctattgtt
tacattgacaacggaatattttatatcggaagtcgtgtggaagatgctttgtttgtcaaa
tatcatgacgataaattaaccgttctaaccgtttcctctcaatttagaccatccactttt
tgttctgaattttctgatttatgcggatctttctttatttctcacggaacaaagaatgga
gggggagcgataacaagtgtcaaaaccggtttattctacaaagaaatgtttgatgctaag
atgacagatatttctactatatcaaaagttgacaataacaaattcatgatgtcaacaaac
aacaaaatatcttttgtttttgatacagataatcaaaagatattgcttaagaataatgag
aaaacaattgattgtttccagacagaaaatggtttcattcaagtttgttctgataaaatt
aatataattgatggttacaaaattacaaaaactgtcaatttgtcagaaatattatcaatg
gattcagaacaaataaatgtctcgaaacaagccaaaaaatcttcatcaaaaagtgacaaa
aataaatcaaaatcaaaagaaaatttagaaaatgaatcaaaaagtgacaacaaattttta
gagattgttaattatgaagagatttcatcatgtgcatatgacaacaagaacaaaatcata
tttattgctgttggtgataaaattaaggttattgatttatcgttaaaagtgacaaaatct
tttgaatttccagaacagatcaaatcgatatcatactacaaaaaattacttgctgcaatt
acatggagcggttttgtaagtacaatagatgattctaatttgtgtactttacagaaacca
catgattttacaccagacaaaatttttgttttaagaagtgaagcaaaccatagaattatt
atagtttacatggacggttttgccatgattacaaagaaagacctaacaatagtcaagaaa
actgttttcggacatatttgctgtggctcatttatgaatgatgagaaaagcgtcataatt
ttgggatcttctccctctctttatttcactgatggaaattcaatgccattgattctgtca
aatgaagattatttctgtggtttaaggttaagtaaagaaataatcatcatggcagatcaa
gagaagtttgttgttggaaatctgaatgaatcagaactttgtcagataaatacaacagag
ttcgatgtcgttcctttccttttgacaatgttacaaaaaccaccgtcactttttattgga
tatttccaagaaggcattttcggattgatgagtttgaatttaccttctatgaaagtcgaa
tacgacattaaatttgaaaatgacatggaattgtcatcattaatttctctgtcaaatgaa
agaatttgtattggtttgactggcaaaaatgaaggaaaaatacaaataattgaaaatgtt
tttgataactatacaattgttggaaatcattcaattgaaggaggagtttttgccttgtca
aaattcaatgaaaaccatttaattgtttgtggacgatgccgattatttttcattgaaatt
cagacatcaaccgctggagctgtcacttttaatgttttacaagctatacaatgtccaagt
atttgcagaagttgtttctcgatgaacgaggacattgttattttatttgatagttttcga
tcgattatttccttcaaattgaatggaaactttttagagagagttaatgaatttcctgtg
aacaaaaatgttgtttgtggatgcattggtgatgagataaaaccaggagtttatgatctt
tattctgcagatgataatggatacttacatgtctacaaaatgaatgttgatgattgttca
atgaaagaaatttcgaattgtaaattgtctgcctctgtttcttgtttgtctaaagtcaga
gagaactttgtgatttgtacaacaagaaatggaggtgtaatgatgctgacgaaagtggat
gagaaactccagaattctttggaaaaggcaagagatgtagttttcgatttgtttagaaat
gacaatgataatgataaatatccaattgtcgacgcaactaatctccagtgtttgaactgt
gcaccatcgaaagcagtttcttcggctttggaagcaagaaatacaacaatttctgaagtg
aattttgctgttcaacaactcaaatcttatgttgcaaaaatttgttctacaaaataa
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