KEGG   Trichomonas vaginalis: 5467231
Entry
5467231           CDS       T01022                                 
Symbol
TVAGG3_0607520
Name
(RefSeq) nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Organism
tva  Trichomonas vaginalis
SSDB
Motif
Pfam: AAA_12 AAA_11 AAA_30 AAA_19 nSTAND3 SRP54 ResIII PhoH UvrD-helicase AAA_16 DEAD AAA_22 AAA HerA_C AAA_25 IstB_IS21 Rad17 AAA_23 NAT10_TcmA_helicase nSTAND_NTPase5 AAA_28 Ploopntkinase3 AAA_7 nSTAND_NTPase7 AAA_5 AAA_29
Other DBs
NCBI-GeneID: 5467231
NCBI-ProteinID: XP_001582656
UniProt: A2DCP6
LinkDB
Position
II:complement(<25361316..>25363625)
AA seq 619 aa
MNDFVEIEHKENEALEHAQSFGGIYPIWKDNQHCTIKAVPGLYRNVSLGSTVKLIQNLDG
NEVTETAKVVQRNKNMTIEIKFGIPSTFFETPNPLTIMNVFNSLVYDRQKAALAAFDTER
KPMDNFIAECILGKPDNFQVRNKIKDSHPVIPELPPAYFKKLNPSQETAIKFILSHRFTL
LQGPPGTGKTTTIAALALSFVKNGISPVLVCAQSNVATDFATLRVAQTGVKVARVLSSNR
EEVAGDVDRYTTKNLARTMFGEEFTKLENDKDEASRKSITRMDSDVVRQSEVVCTTCVSA
GGARLGRIKFQAVIFDESGQCLDPDLLIPLVHGTRQCVLVGDHKQLGPVVVSRQAVKARY
DIPLMQRLILNGIHPLVLRTQYRMHPGLSAFPSEAFYSGMLQDGVTAEHRTWPNQFMKWP
NPKLPLIFWNIPSKEEFYESGLSYVNRHEVGAVAVLLEAMYLGGVKASDIGVITPYAGQQ
IYMIETLPALCAKITDKSFFDEIEIASVDAFQGREKNFIILSNVRANDQHDLGFVKDLHR
LCVSLTRARYGLIVLGCADTFSENKVWCKYIKHCQENRVFVDGSINDFKPSNFSPLIDLN
KNENNSESSDDDAEAGTIY
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgaatgatttcgtcgaaattgaacacaaagaaaacgaagctttggagcatgcacaaagt
ttcggcggtatttacccaatttggaaagataatcagcactgcaccattaaggccgtacca
ggactttatcgtaatgtcagccttggctcaacagtcaagctcattcaaaatttagacgga
aatgaggttactgagacagccaaagtcgtccagcgcaacaagaacatgacaattgagatc
aaattcggaattccatctactttcttcgaaactccaaatccattaacgattatgaacgtt
tttaattcactcgtttacgatcgccagaaggcggcccttgctgcattcgatacagagagg
aagccgatggacaatttcattgcagaatgcatacttggaaagccagataatttccaagtc
cgcaataagatcaaagactcacatccagtgatcccagaactcccaccagcctatttcaag
aagcttaacccatcccaggagaccgccatcaagttcattctctcacatcgtttcacatta
ttacaaggaccaccaggaacaggcaagacaacgaccattgccgctcttgctctcagtttc
gtcaagaatggaatctcccctgtcctcgtctgcgctcaatccaacgttgcaacagatttc
gcaacattaagagtcgctcagacaggcgttaaggtcgcccgtgtcctctcgagcaacaga
gaagaagttgcaggcgacgttgacaggtatacaactaagaatctcgcacgtacaatgttc
ggagaagaatttaccaaacttgagaacgacaaagacgaagcttcccgcaaatccatcacc
cgtatggatagtgatgtcgttcgccagtccgaagttgtctgtacgacctgcgtaagtgcc
ggtggtgcaagattaggccgcattaaattccaagccgtcattttcgatgagtccggacaa
tgcctcgacccagatctcctcatcccactcgtccacggaactcgccaatgcgttctcgtc
ggtgaccacaaacaattgggtcctgtcgttgtttcaaggcaagctgtcaaggccagatac
gatattcctctcatgcagcgcctcatcctcaacggtatccacccattggtccttcgtact
cagtacagaatgcatcctggattatccgccttcccaagtgaagctttctacagcggaatg
cttcaggacggtgtcacagcggaacatagaacatggccaaaccagttcatgaagtggcca
aatccaaaattgccattaattttctggaacatcccttcgaaggaggaattctacgagtca
ggcctctcctacgtcaaccgccatgaggttggcgccgtcgctgtccttcttgaagcaatg
tatctcggtggtgtcaaagcatctgacattggcgtcatcactccttacgcaggacagcag
atctacatgattgagacattaccagccctctgcgcaaagattacggacaaatctttcttt
gatgaaatcgaaattgcttctgtcgacgctttccagggcagagaaaagaacttcattatt
ctctccaacgttagagcgaacgaccagcacgatctcggcttcgtcaaggacttgcacaga
ttatgtgtctcattgacaagagcaagatacggtttgatcgtacttggctgtgcagataca
ttctcagaaaacaaggtttggtgcaaatatatcaaacattgccaagaaaacagagttttc
gtcgatggatctatcaacgacttcaagccttctaacttctcaccactgatcgacctcaat
aagaatgagaataactctgaatcttctgatgatgatgctgaagctggaactatctactaa

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