Trichomonas vaginalis: 5467901
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Entry
5467901 CDS
T01022
Symbol
TVAGG3_0518360
Name
(RefSeq) helicase protein
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
tva
Trichomonas vaginalis
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tva03041
]
5467901 (TVAGG3_0518360)
03009 Ribosome biogenesis [BR:
tva03009
]
5467901 (TVAGG3_0518360)
Enzymes [BR:
tva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
5467901 (TVAGG3_0518360)
Spliceosome [BR:
tva03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
5467901 (TVAGG3_0518360)
Ribosome biogenesis [BR:
tva03009
]
Eukaryotic type
Pre-60S particles
Helicases
5467901 (TVAGG3_0518360)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DsrH
CCDC47
Motif
Other DBs
NCBI-GeneID:
5467901
NCBI-ProteinID:
XP_001583332
UniProt:
A2DB16
LinkDB
All DBs
Position
II:<10132052..>10133829
Genome browser
AA seq
449 aa
AA seq
DB search
MEEDKIISFLDLKLAKPIIRALNENNFTNPTKVQAETIPKILSGQDICATAITGSGKSMA
FLIPIVQKLLTFRGLPGPKALIMSPTRELAQQLKAVCDMLAAHCAITSTLVIGGVSDEEQ
RELLTPAPDIIIGTPGRFIDSIFNAKVLKLEHLQFFVLDEADRLLGKGFESQLNTIVSQL
PEKHQTLLFTATLNDQVAKLATKIQKKSSEKISINPYMELNPNITQMFIKTKKEERRLPY
LVALCRNMCKDKTLVFFPTKALAHHVFLLFKNLGIASAELHADLSQTARNEAIEQFRESK
VQYLLASDLAARGIDIPDIEYVINFTIPNELERYIHRTGRTGRAGKKGTAISMYVTPEEK
RVMKKMQKNSPGEVQFMTIPDNLRDQALESVKQYEEQIEEEKRKEEEEKEKRAEIAAEKR
MKAMLDIEEEVPQKMPGEDAFKRHKKNRK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagacaaaatcatcagtttccttgatttaaagcttgcaaaaccgattattcgt
gctttaaatgaaaacaacttcacaaatccaacaaaagttcaggcagaaactattccaaaa
atcctttctggccaagatatttgtgcgactgcgatcacaggctcaggtaaatctatggcc
ttcttgatcccaatcgttcaaaaactccttactttcagaggtcttcctggtccaaaggcc
ttaattatgagcccaacaagagaacttgcccaacaattaaaagctgtatgtgacatgctt
gcagcacactgcgcaattacatctacattggtcattggtggtgtttcagatgaagaacaa
agagaattacttacacctgcaccagatatcattattggtacaccaggtcgttttattgac
tccattttcaatgccaaagtccttaaactcgaacatcttcagtttttcgtcctcgatgaa
gccgatagacttctcggaaaaggattcgaatcacaactcaacacaattgtcagccaatta
ccagaaaaacatcagacattacttttcacagctacacttaacgaccaagtcgctaaatta
gccactaaaatacagaaaaagtcttcagaaaaaatttcaatcaacccatacatggaatta
aaccctaatattacacaaatgttcattaagaccaagaaagaagagcgtcgtcttccttat
cttgttgctctttgcagaaatatgtgcaaagataaaacattagttttcttcccaacgaaa
gcccttgcacatcacgtattcttacttttcaagaaccttggcattgcttccgccgagctt
cacgctgatctttcccaaacagcacgtaatgaagcaattgaacagtttagagagtcaaaa
gtacaatatttacttgcttcagatcttgcagcacgtggtattgatattcctgatattgaa
tacgttattaacttcacaattccaaatgaattagaaagatacatccacagaacaggtaga
acaggcagagcaggcaagaaaggcactgccatcagtatgtatgtcactccagaagagaaa
agagtcatgaaaaagatgcagaagaactctcctggcgaagttcagttcatgaccatccca
gataaccttagagaccaagcgttagagagtgtgaaacagtacgaagaacagatcgaagag
gaaaagaggaaggaagaagaagaaaaggaaaagagagctgaaattgccgcagaaaagaga
atgaaggcaatgctcgatatcgaagaggaagttcctcaaaagatgcctggtgaagatgct
ttcaagaggcataaaaagaatagaaaataa
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