Trichomonas vaginalis: 5468230
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Entry
5468230 CDS
T01022
Symbol
TVAGG3_0265980
Name
(RefSeq) 3'-tRNA processing endoribonuclease protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tva
Trichomonas vaginalis
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tva03016
]
5468230 (TVAGG3_0265980)
Enzymes [BR:
tva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
5468230 (TVAGG3_0265980)
Transfer RNA biogenesis [BR:
tva03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
5468230 (TVAGG3_0265980)
Prokaryotic type
5468230 (TVAGG3_0265980)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-GeneID:
5468230
NCBI-ProteinID:
XP_001583657
UniProt:
A2DA23
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Position
V:2372953..2374709
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AA seq
577 aa
AA seq
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MKVEIGVISGLSYDSYPVVTITINDKKYLFNSPSFTQRCLMNANVKLSNVNALFVTSNSY
RAIAGLCGYVSECLMTSQTIPIYCAKSCASAVILTSKYSDIHCDVPYKDQFVNIEPIELT
KSVSYVMTIPDEQPKFDAKIAKSYGVKAGLDFKKLKEGNSVTLENGQVITAEMCIGNVEK
GGKILITEVLDLKDLEILKNIEDYVCIVHFSSPEMLKQEQYQAKFANAQTNIAFNMDGRI
CYYTGYDFFEKHHKKDPKLVDKLAVGKPAENIGIFKSYFNGDVFVAFPESKRGFSRAYKL
RDFEEYEPPKLQFNKLAITMLGTNAGFTHLHRVASSIIVHTNDGNIILDCGEGFLEQLRR
KYGLEQANQMIADTLAVYTTHFHWDHCGGIQSLLAERRKFTNRRIPVFCDDFFIEYLKCD
EQTDGDYNVDFILRNENTFNYNKFVLRTIPTEHCENSMGCCLDYDGLRVAYPGDHHILDK
FGETVGHCDILIHEATKGDREDSHEEAWGHSSVWSAEKIGNNLGAKLNVITHISKRFQEK
EITAPSPNMVFAFDFMTVRLEDKDELRAAFDRTIPFK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgagataggtgttatatctggcttatcttatgactcatacccggtagttact
atcactattaatgataaaaagtacctttttaacagtccttcattcacacaaagatgttta
atgaatgcgaacgtcaaattatcaaatgtgaatgctctttttgttacaagtaacagttat
agagctattgcaggtctttgcggttatgtaagcgaatgtctaatgactagccaaacaatt
ccaatttattgtgcaaagagctgtgcatcagctgttatcttaacatcaaaatattctgac
atacattgcgatgtaccatataaagatcagttcgttaatatagaaccaattgaacttact
aaatctgtttcttatgtaatgactattcctgatgagcagccaaaatttgatgcaaagatt
gccaaatcatacggtgtcaaggctggtcttgactttaagaagctaaaagaaggtaattcc
gttacattagagaatggtcaggtaattaccgcagaaatgtgcattggtaatgttgaaaaa
ggaggtaaaatacttattactgaagttcttgatctaaaagatctcgaaatcctcaagaat
atcgaagattatgtttgtatcgttcatttctcatctcctgagatgctaaaacaagaacaa
taccaagcaaaatttgcaaatgcgcaaacaaacattgctttcaacatggatggaagaata
tgctactatacgggctacgatttcttcgaaaagcaccataagaaagatcccaagttagtt
gataagcttgctgtaggaaaaccagctgaaaacattggtattttcaagtcatatttcaat
ggtgatgtttttgtcgcttttccagaatcaaaaagaggtttttcaagggcatataaactc
agagacttcgaagaatacgaaccaccaaagttacaatttaataaattagctattacgatg
ttaggaacaaatgcaggcttcacacatctccacagagttgcctcttcaataattgtccat
acaaatgatggaaatatcatcctggactgcggagaaggatttttggaacaattaagaaga
aaatacggtttggaacaggccaatcagatgattgctgatacattagcagtctatacaaca
catttccactgggatcattgtggtggaatccaatctttgcttgctgaaagaagaaaattt
acaaatcgaaggattcctgtgttttgtgatgatttcttcatcgaatacttgaagtgtgat
gaacaaacagatggagattacaacgtagatttcattttgagaaacgaaaatacttttaat
tataataaatttgttttgagaacgatacctactgagcactgtgagaattcgatgggctgc
tgcttggattacgacggattaagggttgcttacccaggtgatcatcatattttagataaa
ttcggagaaacagttggccactgcgatattttgatccatgaagccacaaaaggtgacaga
gaagattcccatgaagaagcttggggacacagctctgtttggtcggcagaaaaaattgga
aataatttgggagcaaaacttaatgttattactcatatatcaaagagattccaggaaaag
gaaatcactgctccttcgccaaacatggttttcgcatttgacttcatgacagtgagactt
gaagacaaagacgaattgagagcggcttttgacaggacaattccttttaaataa
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