Trichomonas vaginalis: 5468628
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Entry
5468628 CDS
T01022
Symbol
TVAGG3_0529650
Name
(RefSeq) HRDC-like family
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
tva
Trichomonas vaginalis
Pathway
tva03020
RNA polymerase
tva03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
5468628 (TVAGG3_0529650)
09124 Replication and repair
03420 Nucleotide excision repair
5468628 (TVAGG3_0529650)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tva03021
]
5468628 (TVAGG3_0529650)
03400 DNA repair and recombination proteins [BR:
tva03400
]
5468628 (TVAGG3_0529650)
Transcription machinery [BR:
tva03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
5468628 (TVAGG3_0529650)
DNA repair and recombination proteins [BR:
tva03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
5468628 (TVAGG3_0529650)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Motif
Other DBs
NCBI-GeneID:
5468628
NCBI-ProteinID:
XP_001584055
UniProt:
A2D943
LinkDB
All DBs
Position
II:complement(11930568..11931085)
Genome browser
AA seq
119 aa
AA seq
DB search
MATQIKYDEKFITENVCLTNFEVAQRLKSSAFEANQNDDLIGQSYEYALEFSHFQNAEDL
ESIKSYLSDVLSPYEIVTLCNLVPQDAAMAKLCCASLERISDETLQSYLTFIRGLVRSN
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggctacgcagatcaagtacgatgaaaagttcattactgaaaacgtctgtctcacaaat
ttcgaagtagctcaacgtctgaaatcgtcagctttcgaagcaaaccaaaatgatgatctt
attggccaatcatacgaatacgctttagaattttcacattttcaaaatgcagaagactta
gaatcaatcaagtcatatttatctgatgtattatctccatatgaaattgttactctctgc
aatttggttccacaagacgcggcaatggctaaactttgctgtgcttcactcgagagaatc
agtgatgaaactttacaatcatatcttactttcatcagaggcttagtccgttcaaattaa
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