Trichomonas vaginalis: 5468643
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Entry
5468643 CDS
T01022
Symbol
TVAGG3_0529830
Name
(RefSeq) cleavage and polyadenylation specificity factor family member family
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
tva
Trichomonas vaginalis
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tva03041
]
5468643 (TVAGG3_0529830)
Spliceosome [BR:
tva03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
5468643 (TVAGG3_0529830)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
5468643
NCBI-ProteinID:
XP_001584070
UniProt:
A2D958
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All DBs
Position
II:<11958968..>11960794
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AA seq
588 aa
AA seq
DB search
MHSGTKKKKEVHCQLICFGAGGEVGRSSILVEIGSKKVLLDCGVNFTATDEKDRLPAYQD
PFPKVDLVLISHIHTDHLAAVPYLTEVLKCQAPVYMTRASQMMMPIMLDDFLKVTENPPY
KAEDLTNCKPKIKVVEFYSRFEAAPGIFVQAFPAGHILGAACFFVQVRGLSFIYTGDFSA
IADHHLSGHAVPRLFPDLLITESTYGNQVRDSIAKRERSFVQMVHQVVGEGGKVLIPVFA
VGRLQEICLMLEDYWNRMGYTEPIYYTTNLGENCMKVYKQCVNWMNPTVQTNLFDNGSTA
FKFTYSRNFNPKKSKIDESRGLVMLATSGMLNPGTPAFNFFVNEKWYDDPRNMVIFPGYC
GPNTFGRAVLTRDLTTNRVQFTSRRPAMTVDIIIKCKVERISFSAHADQFEIISLCDRVR
PSKVVTIHGDKPSVDALATRITQTTGIPAEAPRNNAKVTTPTKNPNVISISRDCVNFALG
QPSACEGVILKDRDRRYKMISLNDYKKNYSINVYKLNIKRRVKSAVSKEKVAEMLKKLSI
EYVINETESVCKVIAGEITISFLEEYLEVSFPVGQKTLANKLCCLIAQ
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcattcagggactaagaagaagaaagaagtacattgtcaattaatttgctttggcgca
ggtggagaagttggtcgttcatctatccttgttgaaattggatctaaaaaggttttatta
gattgtggtgtaaattttacagccacagatgagaaagacagacttccagcatatcaagat
ccattcccaaaggttgatttagtacttatcagtcatattcatacagatcacttagcagca
gttccatatcttactgaagtactcaaatgtcaagcacctgtatacatgactcgtgcatca
caaatgatgatgcctattatgcttgatgactttcttaaagttaccgaaaatcctccatac
aaagcagaagatctcacgaattgcaagccaaaaatcaaagtcgtcgaattttacagtcgc
ttcgaagcagctccaggcatcttcgtccaagccttcccagcgggacatatccttggcgct
gcctgtttctttgtccaagttcgtggtttatcattcatttacacaggcgacttttcagcg
attgcagaccatcacttatccggtcatgcagttcctcgcctgtttccagacctccttatc
actgaatctacctacggaaatcaagttcgagactcaatcgcgaaacgtgagcgatcattc
gtacaaatggtccaccaggtagttggcgaaggtggcaaggtactcattcctgtcttcgcc
gttggtcgtctccaagaaatatgtttaatgctcgaagattactggaacagaatgggatac
acggagccaatctactacaccacgaacctcggcgagaactgcatgaaagtctacaaacag
tgcgtcaattggatgaatccgaccgttcaaacaaatttatttgacaacggatcaacagcc
ttcaagttcacttactcaaggaacttcaatcccaagaagtccaagattgacgaatccaga
ggtctcgttatgcttgctacgtccggtatgttaaatccgggaactccagcatttaatttc
tttgtcaacgagaaatggtacgatgatccacgcaatatggtcatattcccgggttactgc
ggtccaaatacattcggaagagctgttttgactcgagatttgaccacaaacagagttcag
ttcacttctcgtcgtccggccatgacggttgatatcattattaaatgcaaagttgaaaga
atctctttctcagctcatgcagaccaatttgagataatttctctttgtgatcgcgtcaga
ccatcgaaagtcgttacaattcacggcgacaaaccatcagtcgacgccttggcaacgaga
atcactcaaacaacaggaatccctgcagaagcaccaagaaataacgcaaaagtgacaact
ccaacgaaaaatccaaatgttatttctatatctagagattgcgttaacttcgctttggga
cagccatctgcgtgtgaaggagtcattctgaaggacagggacaggagatacaagatgatt
tcgctgaatgactacaagaaaaactattcaatcaatgtctacaagttgaatattaaaaga
agagttaaatctgctgtttctaaggaaaaagtagcagaaatgcttaagaaactatcaata
gaatacgtgataaatgaaactgaaagcgtttgcaaggtaatcgctggagaaattacaatc
tcctttttggaagaatatttagaagtttctttccctgttggtcagaaaacattggcaaac
aaactttgctgcttgattgcacaataa
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