Trichomonas vaginalis: 5469004
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Entry
5469004 CDS
T01022
Symbol
TVAGG3_1045680
Name
(RefSeq) TBP-class protein binding
KO
K03124
transcription initiation factor TFIIB
Organism
tva
Trichomonas vaginalis
Pathway
tva03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
5469004 (TVAGG3_1045680)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tva03021
]
5469004 (TVAGG3_1045680)
Transcription machinery [BR:
tva03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
5469004 (TVAGG3_1045680)
Prokaryotic type
Archaeal type
TFB
5469004 (TVAGG3_1045680)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
A2L_zn_ribbon
Vps36-NZF-N
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
5469004
NCBI-ProteinID:
XP_001584425
UniProt:
A2D806
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All DBs
Position
I:complement(<24873164..>24874212)
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AA seq
314 aa
AA seq
DB search
MSLKAKRNIYECPHCHTFSMIVNDKTGLLVCNKCGVCADTPLYDETSEYRNFAIEHGVKD
KSRTGYSGDANAADLGTAIQLTGSKNSKLLSDLNKKIVQDSKLIKLKKAMRRISQLVEDM
NLGKPIASKAQEIYKNALDNGLLHNQKLVAVDAVCVYYACIHRKQAIDIADVLKYRDEIT
LKDFHNVEKSLDSLPDLKVTTSFAEVAAGFAETKLHLRPFVCDAILALGRVFEANSSFAG
ADPTTIAGALVLHINDYLLPGFKTTVENVLTVVGKSEKTVLKYKKEIDGLREQTKNIPAV
AELIKIMKDEEMKR
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttaaggcaaagaggaatatttatgagtgtccgcattgccacacattctccatg
attgttaacgacaaaaccggtcttcttgtatgcaataaatgcggtgtttgtgcagatact
ccactttatgatgaaacatccgagtacagaaactttgcaattgaacacggtgttaaagat
aaatcccgtacaggttattctggcgatgcaaatgcggcggatcttggtacagctattcaa
ttaaccggatcaaagaacagcaaattactgagtgacttaaataagaaaattgttcaagat
agtaaactcattaaacttaagaaagctatgagaagaatttcccaacttgttgaagatatg
aatttaggaaaaccaattgcatcaaaagcccaagaaatatacaaaaatgctttggataac
ggtcttcttcacaaccaaaagttagttgctgttgatgctgtttgtgtttattatgcttgt
atacatcgtaaacaagctattgatattgcagatgttcttaaatatcgtgatgaaatcaca
ttaaaagatttccataatgttgaaaaaagtcttgattctttgccagaccttaaagttaca
acatcatttgcagaagttgctgcaggatttgctgagacgaaacttcatcttagacctttc
gtttgcgatgcaattttggctctcggaagagtatttgaagcaaactcttctttcgctggt
gctgatccaacaacaatcgctggcgctctcgttttgcacatcaatgactatctgctacca
ggtttcaaaactactgttgaaaatgtgttgactgtcgtaggaaaatcagaaaaaactgtc
ttgaaatataagaaagaaatcgatggtttgagagaacagactaaaaacattcctgctgta
gctgaattgatcaagattatgaaagatgaagaaatgaagagataa
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