Trichomonas vaginalis: 75678373
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Entry
75678373 CDS
T01022
Symbol
TVAGG3_0910440
Name
(RefSeq) nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tva
Trichomonas vaginalis
Pathway
tva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
75678373 (TVAGG3_0910440)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tva03019
]
75678373 (TVAGG3_0910440)
Messenger RNA biogenesis [BR:
tva03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
75678373 (TVAGG3_0910440)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
75678373 (TVAGG3_0910440)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
75678373
NCBI-ProteinID:
XP_051077356
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All DBs
Position
I:<1734292..>1734932
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AA seq
195 aa
AA seq
DB search
MKNTRLDEEFPALSSISRGPNSLPTNPPIPASPPPSKIAQEQQQMIIDSEIYKDFTPNSD
SQSTLIPDDFGYALDSVMNFIPETPYESDGLIDDCSNDQMYPRPSHTKFIQPEFFKKYDN
DTLFFIFFYSPGTPQQYFASKELKSRGWAFNITQKTWFRAVGEPTDSESDFQTGKFEYFD
HKNPESWMIRQIEKN
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatacgagacttgatgaggaatttccagcactttcctcaatatcacgtggccca
aattctcttccaacgaatccaccaataccagcatctcctccaccatctaaaattgctcag
gaacagcaacaaatgataatagattcagaaatatataaagacttcacgccaaacagcgac
agtcaatcaactcttataccagatgactttggctatgctttagactctgtaatgaatttt
attccagaaacaccatacgaaagcgacggattaatcgacgattgctcaaatgatcaaatg
tatccaagaccatctcacaccaaatttattcagccggaatttttcaagaaatatgacaac
gatacgctatttttcatatttttctacagcccaggtactcctcaacaatatttcgcttca
aaagagctaaaatcgcgcggttgggcattcaatattacacagaaaacatggttcagagct
gtaggagagcctacagatagtgaatcagattttcagacaggaaagttcgaatactttgat
cacaagaaccctgaaagttggatgatacgtcaaatcgaaaagaattaa
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integrated database retrieval system
