KEGG   Trichomonas vaginalis: TVAG_2v0142060
Entry
TVAG_2v0142060    CDS       T01022                                 
Name
(RefSeq) RNA splicing
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
tva  Trichomonas vaginalis
Pathway
tva03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tva00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TVAG_2v0142060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tva03041]
    TVAG_2v0142060
Spliceosome [BR:tva03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    TVAG_2v0142060
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    TVAG_2v0142060
SSDB
Motif
Pfam: PRP38 HIND
Other DBs
NCBI-GeneID: 4744608
NCBI-ProteinID: XP_001299887
UniProt: A2G7A6
LinkDB
Position
IV:21597903..21598941
AA seq 286 aa
MSKNKKLPFSKITSEEKEKEKGKEDNYVHPWWTDTYSFKKYVRGVAPQHLIDTSTRHRIY
NSVYWQQHCFGVNLLTLVDRAQSLKGVGGVYGLFREPCNFICLFLKLLELEPSKKVIEGF
LNTKSWQMKHLRLLAALYVRFVFPAEEVYLILEGLLGQYFKVAVLREEGFKVEYFDTVIY
SFLHDKFWCGITFPPLTPRNNLPPRITPLAHMADKIKEEEFAKLGMNKDGELFEEIEKRK
SEEKQSGRIQFKVKKKVPVPAPQKSEANEIAEENKLRAMLGLPLLH
NT seq 861 nt   +upstreamnt  +downstreamnt
atgtcaaaaaataaaaaattgccattttcgaaaattacatccgaagaaaaagagaaagag
aaaggaaaggaagataattatgtgcatccatggtggacagacacatattcttttaagaag
tatgtcagaggcgttgctcctcagcatctaatcgacacttccacacgacatagaatatac
aattctgtatattggcaacaacattgttttggtgttaatttactgacattagttgatcga
gcacaatctttgaaaggcgttggaggtgtttatggcttgtttcgtgaaccttgtaatttc
atttgcctatttttaaaacttttagaattagaaccatcaaaaaaagttattgagggcttt
ctaaacacgaaatcctggcaaatgaaacacctaagacttcttgctgctctttatgttcgt
ttcgttttccctgctgaagaagtttatttgattttagagggattattagggcagtacttt
aaagtcgctgttctaagagaggaaggcttcaaagtagaatactttgatactgttatttat
tcatttttgcatgataaattttggtgcggaataacatttccaccattaactccaagaaac
aatctccctccccgaataacaccattagcacacatggccgataaaattaaagaagaagaa
tttgccaaacttggaatgaacaaagatggagaattatttgaagagattgaaaagagaaaa
tcagaagaaaagcaatcaggaagaatccaatttaaagtcaaaaagaaggttcctgttcca
gcgccacaaaaatcagaggccaatgaaattgctgaagagaacaaacttagagcaatgctt
ggcttaccactacttcattag

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