Trichomonas vaginalis: TVAG_2v0142060
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Entry
TVAG_2v0142060 CDS
T01022
Name
(RefSeq) RNA splicing
KO
K12849
pre-mRNA-splicing factor 38A
Organism
tva
Trichomonas vaginalis
Pathway
tva03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TVAG_2v0142060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tva03041
]
TVAG_2v0142060
Spliceosome [BR:
tva03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
TVAG_2v0142060
Complex C
U4/U6.U5 tri-SnRNP related factors
TVAG_2v0142060
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Gene cluster
GFIT
Motif
Pfam:
PRP38
HIND
Motif
Other DBs
NCBI-GeneID:
4744608
NCBI-ProteinID:
XP_001299887
UniProt:
A2G7A6
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Position
IV:21597903..21598941
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AA seq
286 aa
AA seq
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MSKNKKLPFSKITSEEKEKEKGKEDNYVHPWWTDTYSFKKYVRGVAPQHLIDTSTRHRIY
NSVYWQQHCFGVNLLTLVDRAQSLKGVGGVYGLFREPCNFICLFLKLLELEPSKKVIEGF
LNTKSWQMKHLRLLAALYVRFVFPAEEVYLILEGLLGQYFKVAVLREEGFKVEYFDTVIY
SFLHDKFWCGITFPPLTPRNNLPPRITPLAHMADKIKEEEFAKLGMNKDGELFEEIEKRK
SEEKQSGRIQFKVKKKVPVPAPQKSEANEIAEENKLRAMLGLPLLH
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaataaaaaattgccattttcgaaaattacatccgaagaaaaagagaaagag
aaaggaaaggaagataattatgtgcatccatggtggacagacacatattcttttaagaag
tatgtcagaggcgttgctcctcagcatctaatcgacacttccacacgacatagaatatac
aattctgtatattggcaacaacattgttttggtgttaatttactgacattagttgatcga
gcacaatctttgaaaggcgttggaggtgtttatggcttgtttcgtgaaccttgtaatttc
atttgcctatttttaaaacttttagaattagaaccatcaaaaaaagttattgagggcttt
ctaaacacgaaatcctggcaaatgaaacacctaagacttcttgctgctctttatgttcgt
ttcgttttccctgctgaagaagtttatttgattttagagggattattagggcagtacttt
aaagtcgctgttctaagagaggaaggcttcaaagtagaatactttgatactgttatttat
tcatttttgcatgataaattttggtgcggaataacatttccaccattaactccaagaaac
aatctccctccccgaataacaccattagcacacatggccgataaaattaaagaagaagaa
tttgccaaacttggaatgaacaaagatggagaattatttgaagagattgaaaagagaaaa
tcagaagaaaagcaatcaggaagaatccaatttaaagtcaaaaagaaggttcctgttcca
gcgccacaaaaatcagaggccaatgaaattgctgaagagaacaaacttagagcaatgctt
ggcttaccactacttcattag
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