Trichomonas vaginalis: TVAG_2v0860700
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Entry
TVAG_2v0860700 CDS
T01022
Name
(RefSeq) ATP-dependent RNA helicase DBP3 family
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tva
Trichomonas vaginalis
Pathway
tva03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TVAG_2v0860700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tva03041
]
TVAG_2v0860700
03009 Ribosome biogenesis [BR:
tva03009
]
TVAG_2v0860700
Enzymes [BR:
tva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TVAG_2v0860700
Spliceosome [BR:
tva03041
]
Complex A
U1 snRNP components
U1 related factors
TVAG_2v0860700
Complex B
TVAG_2v0860700
Ribosome biogenesis [BR:
tva03009
]
Eukaryotic type
Pre-60S particles
Helicases
TVAG_2v0860700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
4767374
NCBI-ProteinID:
XP_001321678
UniProt:
A2ED04
LinkDB
All DBs
Position
VI:13754494..13756087
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AA seq
521 aa
AA seq
DB search
MNRFNGENGKRRSSKSSKRHKKSKSSDSLAKNEELLKSINLNVEYEKTTRLNLTFTPTLT
EEEQKKYLEKNQIKLLGENIPPVAVTFEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGL
KGNDMVGIAKTGSGKTASFLIPALMHISAQRKISENDGPIVLVLSPTRELALQTDEVAAQ
FCVKMGYKHVCIYGGEDRHRQINKLRFHPEIVTATPGRLIDFLQSGVFNPNRANFLVLDE
ADRMLDMGFEPQIRAIIASLTKDRETFMFSATWPKEIRQLASDFLSNPIHMHVGGEELAT
NERIQQNVLLLQEHEKGEKCVEILKENQSKKIIIFAKTKRTVQQLSDFLKSKSIRCLSIH
GDKTQQERVVALDKFKNARTGGVLVATDVAARGLDVTDIDLVLNYDFPGDIEDYVHRIGR
TARGEKTGVAITFFTDENRFLASDLVEVIKNSAQVPPDWLSAMAVHVTKSDGQSITAKKV
YNPRDGNGFGSEADTTITAFGQRSDGYGSFGFGYGGPNSYP
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaacagatttaatggagaaaatggaaaaagaagatcatcaaagagctcgaaaagacat
aaaaaatcaaagagttcggatagtttagcaaaaaacgaagaattattaaaatctattaat
ttaaacgtggaatatgagaaaacaacacgcctaaatctcacttttacaccgacactaaca
gaagaagaacaaaagaaatacctagaaaagaatcaaataaaattacttggtgaaaacatt
cctcctgttgctgtaacattcgaagaattgaatttaccacaagaaataatggaagttatt
aaagagaataattggacaaatccaacaccaattcaatctttatcaattccaatcggatta
aaaggcaatgatatggtaggaatagcgaaaacaggatcaggaaagacagcatcgttttta
atacctgctttaatgcatatatctgctcaaagaaaaatttcagaaaatgatggtccaatt
gtattagtattaagtccaacaagagagttggcattacaaacagatgaggttgctgcacag
ttttgcgtcaaaatgggctataaacacgtttgcatttacggaggagaagatagacacaga
caaatcaacaaattacgcttccatccagagatagtaacagctactcctggtagattaatc
gatttcttacaaagcggagtgtttaatcctaacagagcgaattttttagttttggatgaa
gcagatcgcatgcttgatatgggatttgagccacaaatacgtgcaattatcgcctcattg
acaaaagaccgtgaaacattcatgttttctgcaacttggccgaaagaaattcgacaatta
gcctcagactttctttctaacccaatacatatgcatgttggaggagaagagttggcaact
aatgaaagaatccaacaaaacgttcttcttttgcaagaacacgaaaaaggagaaaaatgt
gttgaaatattaaaagaaaaccagtcgaagaagatcattatatttgctaaaacaaagaga
actgttcaacagctctcagatttcttaaaatcaaaatcaattcgatgcttatcaattcat
ggcgacaaaactcaacaagaaagagttgtagcacttgataaattcaagaatgcaagaaca
ggaggtgttttggtcgctacagatgttgcagctcgtggtttggacgttacagatattgat
ttagttttaaattacgattttccaggcgatattgaggattacgtacatagaattggccgt
acagcaagaggcgagaagacaggagttgcaattacattctttaccgatgaaaacagattt
ttagcttcagatctcgtagaagtcatcaaaaatagcgcacaagtaccacctgattggcta
tcagcaatggctgtacacgtcacaaagagcgatggtcagtcaattactgcaaaaaaggtt
tataatccaagagatggaaatggatttggttctgaagcagatacaaccataacagcattc
ggacaaagatcagacgggtatggatcctttggttttggctacggaggaccaaattcttat
ccataa
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