Trichomonas vaginalis: TVAG_2v0999400
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Entry
TVAG_2v0999400 CDS
T01022
Name
(RefSeq) ATP-dependent RNA helicase family
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
tva
Trichomonas vaginalis
Pathway
tva03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TVAG_2v0999400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tva03041
]
TVAG_2v0999400
03009 Ribosome biogenesis [BR:
tva03009
]
TVAG_2v0999400
Enzymes [BR:
tva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TVAG_2v0999400
Spliceosome [BR:
tva03041
]
Complex A
U2 snRNP components
U2 related factors
TVAG_2v0999400
Complex B
TVAG_2v0999400
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
TVAG_2v0999400
Ribosome biogenesis [BR:
tva03009
]
Eukaryotic type
90S particles
Helicases
TVAG_2v0999400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
AAA_22
HA2_N
AAA_19
Flavi_DEAD
ResIII
AAA_11
T2SSE
SRP54
AAA_23
nSTAND3
SLFN-g3_helicase
PhoH
Motif
Other DBs
NCBI-GeneID:
5467003
NCBI-ProteinID:
XP_001582441
UniProt:
A2DDS9
LinkDB
All DBs
Position
I:16989329..16991567
Genome browser
AA seq
740 aa
AA seq
DB search
MHPAAEVEVHHRRRRHHHNSNAAETTPEEAQQITEKVAQLEESGEINPYTNKPYSKNYYK
ILETRMKLPVYERKDEIIEAVRNSKVTIIEGSTGSGKTTQIPRFLLEANIIDPSQKIVCT
QPRRVAAINVASRVADEMDIELGAEVGYCVRFDAKETSKTRLTYMTDGLLMREFVIDPNV
TKYGIIIIDEAHERTINSDIIIGLLKRLVNKRDDLKVVVMSATLEATKFQRFFDNITDDS
EPCVTPHIVVPGRLHKVVKVYTEAAVPNYLNEAVSRTLDIHFNQPEGDILLFLTGEEEIE
STCDRLRAEISGQTHSTGISAYVLPLYASLPPQEQAKVFKPAKYPNTRKIIVSTNIAETS
VTIDGVVYVIDPGMVKQNTYNPERRMSSLLVVPISKAAAVQRAGRAGRTRRGICYRLYTQ
ETFEKELQEQTTPEIQRSDLASVLLLMLAAGISDIMHFPFIDPPEYKLVKSSIEELYFLG
AVDIQGNLTEKGRLMSLIPIEPKLAAALISSKDFNCTVEMATIVAMLSEQGQPFMRPVKE
SAMADAAHRPFKCGFSDHISLLRCFNEFAKDPSKNFCNQHYLNYRMLDRAYKSRQQLLSL
LRKNGIEAVSIYDDKECQNPEKHIIHALLMGMFMQTCVYNPPTKQYSFMTGQKEADIHPS
SSIRSIPTWLIYTEYVFTNSEFIRGCSEIEDSWIIQSCPEFFDPERYPIGNIKNALRRLI
DNENRKKKEELYIMNRVIFL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcatccagcagcagaagttgaagttcaccatcgccgaaggagacatcatcataatagt
aatgctgctgagacaacacctgaagaggcgcagcaaattacagaaaaagttgcgcaatta
gaagaatcaggtgaaattaatccttacacaaacaagccatacagcaagaattattacaaa
atcctcgaaaccagaatgaaattacctgtttatgagagaaaagatgagattattgaagct
gtaaggaacagcaaagttacaatcatcgaaggttcaacaggttccggtaaaacaacacag
attccacgatttctccttgaagccaacattattgacccatcacaaaagattgtttgtact
caacctcgtagagttgctgcaatcaacgtcgcatcacgtgttgctgatgagatggatatc
gaacttggcgcagaagttggttactgtgtcagattcgatgcgaaggagacctcaaagaca
cgccttacctatatgactgatggtcttttgatgagagaattcgttatcgatccaaatgta
acaaaatacggtatcatcatcatcgatgaagcccacgaacgtacaattaacagcgatatt
atcatcggtttactcaagagattagttaataaacgtgatgatctcaaagttgtcgtcatg
tctgctactctcgaagccaccaaattccagcgcttcttcgataatatcaccgacgattcc
gaaccatgcgttactccacacattgtcgttcccggcagattacataaggtcgttaaggtc
tatacagaggcagcagtgccaaactacctcaacgaagctgtttcccgtacactagatatc
catttcaaccagccagaaggcgatatcctccttttcctcactggtgaagaagaaatcgag
tcaacatgtgacagattacgagctgaaatctcaggccagacacattccacaggtataagt
gcatacgttcttcctctatacgcatccttgcctccacaggaacaagcgaaagttttcaaa
ccggccaaatatccaaacacgaggaaaatcattgtttccacaaatattgcagaaacatct
gtcaccattgacggtgttgtttatgtcattgatccaggcatggtcaagcaaaacacatat
aatccggagcgtagaatgtcttctcttttagttgtccccatttcgaaagcagctgctgta
caaagggcaggacgtgcaggcagaacaagaagaggtatctgctacagattgtacactcaa
gaaactttcgaaaaagaacttcaagagcagacaacacctgaaatacaacgctctgatttg
gcaagtgttttattgttgatgctggccgctggaatttccgacataatgcacttcccattt
atagatccgcctgaatacaaactcgtcaaatcttccattgaagaactctacttcctcggt
gctgtcgacatccaaggaaatctcactgaaaaaggccgtttaatgtccttgattccaatc
gaaccaaaacttgctgcggctttgatttcatccaaagatttcaactgcacagtggagatg
gcaacaatcgttgcaatgctttctgaacaaggacagccattcatgagacctgtcaaagaa
agcgcaatggctgatgcagctcaccgaccatttaagtgcggtttttcagatcacatttca
cttctcaggtgttttaacgagtttgcgaaagacccatcgaagaacttttgcaaccagcac
tacttgaattacaggatgcttgacagggcttataaatcaagacagcaattgctttctttg
ttgagaaagaatggaattgaagctgtttcgatttatgatgacaaagaatgtcaaaatcca
gaaaaacatatcattcatgcacttttgatgggaatgttcatgcagacatgtgtttataat
ccaccaacaaaacagtactcgttcatgactggccagaaagaggctgatatccatccttct
tcttcaattagaagtattccaacatggctcatatacactgagtatgttttcactaatagt
gagttcattagaggatgttctgagatagaagactcatggataatccaatcttgccctgaa
ttcttcgatcctgaaagatatccaatcggaaacatcaaaaatgccctcaggagattgata
gataacgaaaatagaaagaagaaagaagaattatatattatgaatagagttatattttta
tag
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integrated database retrieval system
