Trichomonas vaginalis: TVAG_2v1036500
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Entry
TVAG_2v1036500 CDS
T01022
Name
(RefSeq) ATP-dependent RNA helicase family
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
tva
Trichomonas vaginalis
Pathway
tva03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TVAG_2v1036500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tva03041
]
TVAG_2v1036500
03009 Ribosome biogenesis [BR:
tva03009
]
TVAG_2v1036500
Enzymes [BR:
tva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TVAG_2v1036500
Spliceosome [BR:
tva03041
]
Complex A
U2 snRNP components
U2 related factors
TVAG_2v1036500
Complex B
TVAG_2v1036500
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
TVAG_2v1036500
Ribosome biogenesis [BR:
tva03009
]
Eukaryotic type
90S particles
Helicases
TVAG_2v1036500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
nSTAND3
ResIII
AAA_22
AAA_19
Flavi_DEAD
PTPlike_phytase
SLFN-g3_helicase
Microtub_bd
T2SSE
AAA_11
Motif
Other DBs
NCBI-GeneID:
5464897
NCBI-ProteinID:
XP_001580355
UniProt:
A2DJG9
LinkDB
All DBs
Position
I:complement(23298472..23300547)
Genome browser
AA seq
691 aa
AA seq
DB search
MHLENQENNRKNHEINPYENKPYSTEYYRILETRKKLPVYEYKDQILKIVRESNVCIIEG
NTGSGKTTQIPQFILESGILNPKQSMICSQPRRVAAINVATRVSAELDCKLGGIVGYNVR
FDKCISDQTKLIYMTDGLLLREFLLDPYLRNYGVIIIDEAHERTINTDIILGLLHQALSH
RKDLKLIVMSATLEATKFTKFFTINEKIPPHLSIPGRLHPVTIEYETVKVDNYVEKAIEK
AIFIHEKEGSGDILIFLTGEDEIEHCCSVLRSKLKPELATGARISEIKVFPLYSSLPLIE
QTKVFVPPSESVRKVIVATNIAETSLTIDGIVFVIDSGLVKQTMYVPKRRMSSLQVTNVS
RASSIQRSGRAGRTRPGKCFRLYTEKDFNEVLPDQTEPEISRSNLSSVLLLMLAVGIKDI
PGFPFIDMPHRHLIRAAIEELHFLGAVDSNCQLTDIGRLMSQFPLEPGLSRALIQAKDFG
CNKEVAALVSLLSEQGQVFLRPKKDLERALQMQMQFKNQTSDHITLLTAFEAFTIFKSEK
FCNENFLNFRTLESALKSQGQLIEMMQKMNIPVVSASRINPNRNKLILQSLLTGLFTNVA
FYDKSGYLFSECLEAAPIHRASCLWGKTPKWVLFSEYVFTDKGYIRTVSEIDESWIVPSS
EEYFESSRFKGRPVQQMFANLYQKYAKKQGK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcatttggaaaatcaggaaaataatcgaaaaaatcatgaaattaatccatacgaaaac
aaaccttattcaacagagtattacagaatacttgaaactcgtaaaaaacttccggtttac
gaatacaaagatcaaattttaaaaatcgttagagaaagtaatgtttgcattatcgagggt
aatacaggatcaggtaaaacaactcaaataccacaatttatacttgaatcaggaatttta
aatccaaaacaatcaatgatttgctctcagccaagaagagtcgctgcaatcaatgtagca
actcgtgtttcagcagaactagactgcaaacttggtgggattgttggttacaacgtaaga
tttgacaaatgcatttcggatcaaacaaaattaatttatatgacagatggacttcttctt
agagagtttcttctcgatccgtacctaagaaattatggagttatcatcatagatgaagca
catgaaagaacaataaatacagacatcattcttggccttttacatcaagctttatcgcat
agaaaagatttaaagcttattgttatgtctgccactctagaagcaactaaatttacaaag
tttttcacaataaatgaaaaaattcctcctcatctatctattcctggccgattacaccca
gttacaattgaatatgagactgtgaaggttgacaattacgtagaaaaagccattgaaaaa
gcaatttttattcatgaaaaagaaggatcaggcgatattttgatatttttgactggtgaa
gatgaaattgagcattgctgcagtgtattgagatcaaagcttaaaccagaactagctaca
ggagcgagaatttccgaaattaaagtatttcctttatattcttctttgccattgatagaa
cagacaaaagtttttgttcctccatcggaatcagtgcgaaaggtgattgttgcaaccaat
attgctgaaacatcattgacaattgatggaattgtctttgtaattgactcaggattggtc
aaacaaacgatgtacgtaccgaaacgaagaatgtcatcactccaagtaactaatgtctca
cgagcaagctctattcaacgttcaggacgtgctggaagaacaaggccaggaaaatgcttc
agattatacaccgaaaaagattttaatgaagttcttcccgaccaaacggagccagagatc
agtcgcagcaatctatcaagtgttctcttgctcatgcttgcagtcggcatcaaggatatt
ccaggatttcctttcatcgacatgccgcacagacatttaattcgtgcggccatcgaggaa
cttcactttttgggcgctgttgacagtaattgtcaattgactgatatcgggcgcttgatg
tcccaattccctttggaaccaggattaagtcgtgcattgatacaagctaaagatttcgga
tgcaacaaagaagttgcagctttagtttctttgctttctgaacaaggacaagtgtttttg
aggccaaagaaggatctcgaacgggcattgcaaatgcagatgcagttcaagaaccaaaca
agtgaccacataacattgttaactgcgtttgaagcttttacaattttcaaaagtgaaaaa
ttttgtaatgaaaattttctgaattttcggacattggaaagtgcattgaaatctcaagga
cagctaatagagatgatgcagaaaatgaatattcctgttgtgtccgcatcaaggattaat
ccaaatagaaacaaactaattttacaatcacttttgactggattgtttacaaatgttgct
ttttatgataagtcaggatatttgttttctgagtgtttggaggcagcaccaatacacaga
gcttcctgcttatggggaaagactccgaaatgggttctgttctcagaatatgtgttcact
gataaaggatacataagaactgtctccgaaatcgatgaaagttggattgttccatcaagt
gaagaatactttgagtcaagtagattcaaaggacgtcctgttcaacagatgtttgctaac
ttatatcagaaatacgctaaaaagcaaggaaaataa
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