Tenacibaculum vairaonense: T19A02B_0850
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Entry
T19A02B_0850 CDS
T11462
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
tvai Tenacibaculum vairaonense
Brite
KEGG Orthology (KO) [BR:
tvai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvai03400
]
T19A02B_0850
DNA repair and recombination proteins [BR:
tvai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
T19A02B_0850
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Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
TrwB_AAD_bind
AAA_22
AAA_16
AAA
AAA_30
FtsK_SpoIIIE
ResIII
CbiA
TraG-D_C
AAA_19
P-loop_TraG
Zot
AAA_7
RF-1
Zeta_toxin
DUF755
T2SSE
AAA_6
SRP54
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
CAL2079752
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All DBs
Position
T190524A02B:1043288..1044808
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AA seq
506 aa
AA seq
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MSDSTKFLNYINQGYSCKGDFITLGAGMLGEDTITNALVNIPLKTLNRHGLIAGATGTGK
TKTLQVLAENMSEKGIPVLLMDVKGDLSGLAQASQGHPKIDERHEKIGIPFNAKEFPIEV
LTISEQDGVRLRATVSEFGPVLLSRILDLTETQSGIVAIIFKYCDDNHLPLLDLKDFKKM
LQFITNEGKEEIQEEYGRISTASTGAILRKLVEIEQQGGDLFFGEKSFEVDDLTRIDENG
RGVISVLRLTDIQDKPKLFSTFMLQLLAEVYETFPEQGDSGRPELIIFIDEAHLVFDEAS
KALLSQIESIVKLIRSKGIGLYFVTQNPKDVPEDVLAQLGMKIQHALRAFTAKDRKAIKL
AAENYPDSEYYDTKEVLTQLGIGEALVSVLNEKGIPTPLARTMLRAPMSRMDVLTEKELQ
EVLDNSKLISKYNKLVDRESAYELLNDKIKRINKEKSEEDERKEREKTRKKSSSTRSRST
RMNPVVKVLTSATFIRSVFGILKKVL
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattcaactaaatttttaaactatataaatcaaggatatagttgcaaaggagat
tttattacgttaggagcaggaatgctaggggaggatacaattacaaatgcgctagtaaat
attcctttaaaaacgttgaatcggcatggattaatagctggagctactggtactggaaaa
acaaagacattacaagttttagctgaaaatatgtcggaaaaggggattccagttttgtta
atggacgtaaaaggagatttaagtggtttagcacaggctagtcaaggacatcctaaaata
gatgaacgtcatgaaaaaataggaattccatttaatgctaaagagtttcctattgaagtt
ttaactatttcagaacaagatggggttcgattaagagcaactgtttctgaattcgggcct
gtactattatccagaattttggatttaactgagacacaatctggtattgtagctattatt
tttaagtactgtgatgataatcatttgccattgttagatttaaaggattttaaaaaaatg
cttcaatttataactaacgaagggaaagaggaaattcaagaagaatacgggagaatttcc
acagcaagtacgggcgctattttacgaaagttagtagagatagaacaacaaggaggtgat
ttgttttttggggaaaaatcttttgaggttgatgatttaactcgtattgatgaaaatgga
agaggagtgatatctgtattgagattgacagatattcaagataaaccaaagctgttttca
acttttatgctacagttgttagcagaagtatatgagacttttccagaacaaggagatagt
ggaagaccagaattgataatttttattgatgaagctcatttagtttttgatgaagcttct
aaagcattgttaagccaaattgaaagtattgtaaaattaatcaggtctaaaggaatagga
ctttattttgtaactcaaaaccctaaagatgtgccagaagatgtcttagcgcaattaggg
atgaaaattcagcatgcattaagagcttttacagccaaggatagaaaagccattaaatta
gcagctgagaattacccagattctgaatattacgatacaaaagaagtattgacacaacta
gggattggtgaagcattagtgtctgtacttaatgaaaaaggaattccaacgccattggct
agaaccatgttaagagctcctatgagtagaatggatgtgttaacagaaaaagaattacaa
gaagtattagataattctaagttaatttcaaagtataacaaactagttgatagagaaagt
gcttatgaattattgaatgataaaataaaaagaataaataaagaaaagtcggaagaagat
gaaagaaaagaaagagaaaaaacaagaaaaaaatcttcttcaacaagaagtagaagcaca
agaatgaatcctgtagttaaagttttaactagtgctacttttattagaagtgtctttggg
atattaaaaaaagtactttaa
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