Tenacibaculum vairaonense: T19A02B_2350
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Entry
T19A02B_2350 CDS
T11462
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase 1
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
tvai Tenacibaculum vairaonense
Pathway
tvai00521
Streptomycin biosynthesis
tvai00523
Polyketide sugar unit biosynthesis
tvai00525
Acarbose and validamycin biosynthesis
tvai00541
Biosynthesis of various nucleotide sugars
tvai01100
Metabolic pathways
tvai01110
Biosynthesis of secondary metabolites
tvai01250
Biosynthesis of nucleotide sugars
Module
tvai_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
tvai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
T19A02B_2350 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
T19A02B_2350 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
T19A02B_2350 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
T19A02B_2350 (rfbB)
00525 Acarbose and validamycin biosynthesis
T19A02B_2350 (rfbB)
Enzymes [BR:
tvai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
T19A02B_2350 (rfbB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
NAD_binding_10
KR
NmrA
DyP_N
Pfc11_Clp1_ID
Motif
Other DBs
NCBI-ProteinID:
CAL2088293
LinkDB
All DBs
Position
T190524A02B:complement(2802840..2803889)
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AA seq
349 aa
AA seq
DB search
MKNILITGGAGFIGSHVVRLFVNTYPDYNIINLDALTYAGNLANLKDLEDKPNYRFVKAD
ICDYKKIEDIFTEHDIDGVIHLAAESHVDRSIKDPFSFAQTNVMGTLSLLQAAKNKWNGK
FEGKLFYHVSTDEVYGSLGEDGFFTEETAYDPHSPYSASKASSDHFVRAFHDTYGLPVVI
SNCSNNYGSYQFPEKLIPLFINNICNNKPLPVYGKGENVRDWLFVNDHARAIDVIFHRGK
LGDTYNIGGFNEWKNIDLIKVIIKTVDKLLGRTEGTSESLIAYVTDRAGHDYRYAIDSTK
LKDELGWEPSLQFEEGIEKTVKWYLDNEDWVKNVTSGNYQKYYQDMYES
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatatattaattactggaggagcagggtttattggatcgcatgtagtacgatta
tttgttaatacgtatcctgattataatattataaatttagatgctttaacttatgcaggt
aacttggctaatctaaaagatttagaagataaacctaactatcgttttgtaaaagcagat
atttgtgattataaaaaaatagaagatatattcactgagcatgatattgatggtgtcata
catttagctgcggaatcacatgtggataggtctattaaagatccgttttcatttgctcaa
acaaatgtaatgggaactttaagtttactacaagcagctaaaaataaatggaatggtaaa
tttgaaggtaaactattctaccatgtttccactgatgaagtttatggaagtttaggagaa
gatggttttttcactgaagaaacagcttatgacccacattcaccatattcagcatctaaa
gcctcttctgatcattttgtaagagcatttcatgatacatatggcttaccagtagtaatc
tctaattgctctaataattatggttcgtatcaatttccagagaaattaattcctttattt
attaataatatttgtaataacaaacctttacctgtgtacggaaaaggagaaaatgttaga
gattggctgtttgtaaatgatcatgcaagagccatagatgttatttttcatagagggaag
ctaggtgatacttataatattggtgggtttaatgaatggaagaatattgatttaataaaa
gtaattattaaaacagtagataaactcttaggaagaacagaaggaacttctgagagtttg
atagcttacgttacagatagagcagggcatgattataggtatgctatagattctaccaaa
ctaaaagatgaattaggatgggaaccttcattacagtttgaagaaggtatagagaagact
gtaaaatggtatttagacaatgaagattgggtgaaaaatgtaactagcggaaattatcaa
aaatattatcaagatatgtacgaaagttag
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