Tenacibaculum vairaonense: T19A02B_2600
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Entry
T19A02B_2600 CDS
T11462
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tvai Tenacibaculum vairaonense
Pathway
tvai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
T19A02B_2600 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvai03019
]
T19A02B_2600 (rhlE)
Enzymes [BR:
tvai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
T19A02B_2600 (rhlE)
Messenger RNA biogenesis [BR:
tvai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
T19A02B_2600 (rhlE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
NAT10_TcmA_helicase
CMS1
Cas3-like_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAL2089482
LinkDB
All DBs
Position
T190524A02B:3081551..3082783
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AA seq
410 aa
AA seq
DB search
MYFSDLPIHKTILKALAENKHHTATPVQQKAIPLILEQKDVVVTAQTGTGKTAAFALPII
QGLLKEQDTVQGGKKIKALIVSPTRELAIQIHESFTKYGKYTNLRSTAVFGGMSTAPQKD
VLKKGIDVLIATPGRLIDLHKQNSIDLNSLKTLVLDEADLMLDMGFVEDVKRIEKLCPRK
KQTLLFSATMPKKIAELAKNMLYKPEKITIAPSGTTAKNIGQLLYYVPKKNKTDLCLHLL
RNTIQGKIIIFRRTKFGVDKLEQTLIKNGYKVTSLHGDKTQALRNKAIEDFKEKKATILI
ATDVAARGIDISKIDAVINFDLPNIPETYVHRIGRTGRAGKSGIALSFCSADETSYIKNI
QELLQKQITIIEDHPFPLHKPKPKKQPNTISKHKKGRKSTNSKKNKKRWY
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtatttttctgacttacctattcataaaacaattttaaaagcgttagctgaaaacaag
catcataccgctactcctgttcaacaaaaagcaattcctcttattttagaacaaaaagat
gtagtggtaactgctcaaactggtactggaaaaacggctgcttttgcgctacctattatt
caaggtttattaaaagaacaagatactgtacaaggtggtaaaaagattaaagctttaatt
gttagccctactcgtgagttggctattcaaattcacgaaagttttaccaaatatggaaaa
tacaccaatttaagaagtactgctgtatttggcggcatgtctacggctccacaaaaagat
gtactaaaaaaaggaattgatgttttaattgctacgcctggtaggttaattgatttacac
aaacaaaattcaattgacttaaattcattaaaaactcttgtattagatgaagctgattta
atgttagatatggggtttgttgaagatgtgaaacgaattgaaaaattatgtcctcgtaaa
aaacaaacattacttttctctgcaactatgcccaaaaagattgcagaattagctaaaaat
atgctatataaacctgaaaagataactattgctccttcaggtactactgctaaaaacata
ggccagttattatactatgtacctaagaaaaataaaactgacttatgcctacatctactt
cggaatacgatacaaggtaaaataattatttttagacgtaccaaatttggtgttgacaaa
ttagaacaaacacttataaaaaacggttataaagtaactagcttgcatggagacaaaaca
caagcactccgtaataaagctattgaagattttaaagagaaaaaagctactattttaatt
gctacagatgttgctgctagaggcatagatattagtaaaattgatgcggttattaacttt
gacttacctaatatccccgaaacatatgtgcatagaataggcagaacaggtagagctgga
aaatcaggaattgccttatcattttgtagtgcagatgaaacttcttatataaaaaacatc
caagagttattacaaaagcaaataactattattgaagaccatccatttcctttacataaa
cccaaacctaaaaaacaacctaacactattagcaaacataaaaaagggagaaaatctacc
aattccaaaaaaaacaaaaaaaggtggtactaa
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