Tenacibaculum vairaonense: T19A02B_2656
Help
Entry
T19A02B_2656 CDS
T11462
Name
(GenBank) Protein RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
tvai Tenacibaculum vairaonense
Brite
KEGG Orthology (KO) [BR:
tvai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tvai03016
]
T19A02B_2656
Enzymes [BR:
tvai01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
T19A02B_2656
Transfer RNA biogenesis [BR:
tvai03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
T19A02B_2656
Prokaryotic type
tRNA splicing ligases
T19A02B_2656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
CAL2089751
LinkDB
All DBs
Position
T190524A02B:complement(3156835..3158226)
Genome browser
AA seq
463 aa
AA seq
DB search
MGKKLKGKDLINLGFPKNNSINIALGQINRYRKKEKKERILEETKDVLLHPKKYEGNAIW
GKVAEGLIKPVEVKMHQLRNTRAPFSIYGENEIDDQAKYQLYDALKLPIAVQGALMPDAH
SGYGLPIGGVLATENAVIPYGVGLDIGCRMALSIFPMKASYIKGKQHQMVNILSEHTKFG
MYETHAKKQDHEIFERAEFKEIPLIKRLKTKAYNQLGSSGGGNHFVEFGIVNITDENNEF
NVPVGEYVGLLSHSGSRGLGANIAKHYTYLASKQCPLPKNVQHLAWLDMNTHDGQEYWMA
MNLAGDYAKACHDNIHQRIAKLLGVKPLTMIENHHNFAWKEQVNGVERIVHRKGATPASK
GELGIIPGSMVAPGYIVRGLGNQESLQSASHGAGRKHSRRKCKEKFTKSDIKHQLNRNEV
TLIGGGVDEAPMAYKNIKKVMANQQELVEVVGTFTPKIVRMDR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaaactaaaaggaaaagacctaattaatttaggatttccaaaaaacaatagt
ataaacatcgctctagggcaaattaaccgatatagaaaaaaagaaaagaaagaacgcatt
ttagaagaaaccaaagacgttttgcttcatccaaaaaaatacgaaggaaatgcgatatgg
gggaaagttgcagaaggtttaataaaaccagtagaagttaaaatgcatcaattaagaaat
acaagagcaccgttttcaatttatggagaaaatgaaattgatgaccaagctaagtatcag
ctttacgacgccttaaagttaccaatagcagtgcaaggcgcattaatgccagacgcacac
tcgggatacggtttgcccattggaggtgttttagcaacagaaaatgcagtaattccatac
ggagttgggttagatattggctgtagaatggcactcagtatatttccaatgaaagcttcc
tatataaaaggaaagcaacaccaaatggtaaatatactttcagaacataccaagtttgga
atgtatgaaacacacgctaaaaaacaagatcatgaaatatttgagcgtgctgaatttaaa
gagattcctttgataaaacgtttaaaaaccaaagcatacaatcaattaggaagttcagga
ggcggaaaccattttgtagaatttggaattgtaaacataacagatgagaacaatgaattt
aatgtaccagtaggtgagtatgtaggcttgttatcacatagtggaagtagaggtttaggc
gcaaacatagccaaacattatacttatttagcaagtaaacaatgtccgctaccaaaaaat
gtacaacatttagcgtggttggatatgaatacgcatgatggacaagaatattggatggct
atgaatttagcaggtgattatgccaaagcttgtcatgataacattcaccaacgaattgca
aaattgttaggcgtaaaacctttaacaatgattgaaaaccatcacaattttgcatggaaa
gagcaagtaaacggtgtagagcgtattgtacatagaaaaggagcaacaccagctagtaaa
ggcgaattaggaattattccgggatctatggtagcaccaggttatattgttcgaggcttg
ggaaatcaagaaagcttacaatcggcatcacacggagcaggacgaaaacattcaagaaga
aaatgcaaagagaagtttacaaaaagcgatatcaagcatcaattaaataggaatgaagta
accttaattggaggtggtgttgatgaagccccaatggcgtataaaaacatcaaaaaagta
atggcaaaccaacaagaattagtagaggtagttggcacttttacgcctaagattgtgaga
atggataggtag
DBGET
integrated database retrieval system
