Tenacibaculum vairaonense: T19A02B_3219
Help
Entry
T19A02B_3219 CDS
T11462
Symbol
aspS
Name
(GenBank) Aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
tvai Tenacibaculum vairaonense
Pathway
tvai00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tvai00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
T19A02B_3219 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tvai01007
]
T19A02B_3219 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tvai03016
]
T19A02B_3219 (aspS)
03029 Mitochondrial biogenesis [BR:
tvai03029
]
T19A02B_3219 (aspS)
Enzymes [BR:
tvai01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
T19A02B_3219 (aspS)
Amino acid related enzymes [BR:
tvai01007
]
Aminoacyl-tRNA synthetase
Class II (A)
T19A02B_3219 (aspS)
Transfer RNA biogenesis [BR:
tvai03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
T19A02B_3219 (aspS)
Prokaryotic type
Other AARSs
T19A02B_3219 (aspS)
Mitochondrial biogenesis [BR:
tvai03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
T19A02B_3219 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
tRNA-synt_2b
FR47
Motif
Other DBs
NCBI-ProteinID:
CAL2092400
LinkDB
All DBs
Position
T190524A02B:3947990..3949750
Genome browser
AA seq
586 aa
AA seq
DB search
MYRTHTCGELRASHINSEVTLSGWVQKSRDKGFMIWIDLRDRYGITQLIFDEERTSKELM
EQAKTLGREFVVQVKGTVIERASKNANIPTGDVEVLVSELTILNEAKLPPFTIEDETDGG
EDLRMKYRYLDIRRNPVKESLVFRHKVSMEVRKYLSDKGFIDVETPYLIKSTPEGARDFL
VPSRMNAGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMA
FVEQEDILEIFEGMTRHLLKEINGVEVAKFPRITFDEAMRKYGNDKPDIRFGMEFGELNE
VAQHKEFKVFNEAELVVGIAVPGGASYTRKEIDKLIDWVKRPQVGALGMVYVKCNEDGSF
KSSVDKFYDQEDLAKWAEATGAKAGDLICVLSGKTTKVRAQLSALRMEMAERLELRKSDE
FAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLELLDTDPGAVKANAYDLVLNGNEI
GGGSIRIHDKETQAVMFKHLGFSPEEAKEQFGFLMDAFEYGAPPHGGLAFGLDRLVAILG
GQETIRDFIAFPKNNSGRDVMIDAPATIDDDQLEELSIQLALQEKA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtacagaacgcatacttgtggtgaattaagagcatcgcacataaattcagaagtaacc
ctttcaggatgggtacaaaaatcacgtgacaaaggttttatgatttggattgatttacgt
gatcgttacggaattacacagttaatttttgatgaagagcgtacttcaaaagaattaatg
gagcaggctaaaactttaggtagagagtttgttgtacaagtaaaaggtactgtaattgag
cgtgcttctaaaaatgcaaatattccaacgggtgatgttgaagtattagtttctgaatta
actattttaaacgaggcgaagttaccaccatttacaattgaagatgaaacggatggaggt
gaagatttacgtatgaagtatcgttatttagatattcgtcgtaaccctgtaaaagagagt
ttagtttttcgccataaagtatctatggaagttcgtaaatacctttctgataaaggattt
attgatgtagaaactccatatttaattaagtcaacaccagaaggagcaagagatttttta
gtgccttcacgtatgaatgctggtcagttttatgcattacctcaaagtccacaaaccttt
aaacagttattaatggtaggtggtatggataaatatttccaaattgtaaaatgttttaga
gatgaggatttacgtgcagaccgtcagccagaatttacgcaaatagactgcgaaatggca
tttgttgaacaagaagatattttagagatatttgaaggaatgacgcgtcatttattaaaa
gaaattaatggtgttgaggtagcaaaattccctagaattacttttgatgaagcaatgcgt
aagtatggtaatgataagccagatattcgttttgggatggagtttggagaattgaatgag
gtggcacagcacaaggaatttaaagtgtttaatgaagcagagttagtagtaggaattgca
gtacctggaggtgcttcatatacacgtaaggaaatagataaattaatagattgggtaaag
cgtccgcaagtgggagctttaggaatggtttatgtaaagtgcaatgaagacggttctttc
aagtcgtcagttgataagttttatgatcaagaagatttagctaagtgggcagaggcaact
ggagctaaagctggtgatttaatttgcgtactttctggtaaaaccactaaggttagagcg
caattaagtgctttacgtatggaaatggcagagcgtttagaactacgtaagtctgatgag
tttgcaccgttatgggtaattgactttccattgttggaattagatgaggaaacgggacat
tatcatgcaatgcaccatccgtttacttctccaaagccaggacaattagagctattagat
acagatccaggagcagtaaaagcaaatgcgtacgatttagttttaaatggtaatgaaata
ggtggaggatctattagaatacatgataaagaaacgcaagctgttatgtttaagcattta
gggttttcacctgaagaagctaaagaacaatttggtttcttaatggatgcttttgagtac
ggggcaccaccacatggaggcttggcatttggattagatcgtttggtagctattttaggc
ggacaagaaacaattcgtgattttattgctttccctaagaataattcaggacgtgatgta
atgatagatgcaccagctactattgatgatgatcaattagaagaattaagtattcaatta
gcacttcaagaaaaagcataa
DBGET
integrated database retrieval system
