Tenacibaculum vairaonense: T19A02B_3917
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Entry
T19A02B_3917 CDS
T11462
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tvai Tenacibaculum vairaonense
Pathway
tvai03420
Nucleotide excision repair
tvai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tvai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
T19A02B_3917 (pcrA)
03430 Mismatch repair
T19A02B_3917 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvai03400
]
T19A02B_3917 (pcrA)
Enzymes [BR:
tvai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
T19A02B_3917 (pcrA)
DNA repair and recombination proteins [BR:
tvai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
T19A02B_3917 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
T19A02B_3917 (pcrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
ResIII
IMP_cyclohyd
Motif
Other DBs
NCBI-ProteinID:
CAL2095378
LinkDB
All DBs
Position
T190524A02B:4700981..4703311
Genome browser
AA seq
776 aa
AA seq
DB search
MDTYLEQLNEPQRAAVLQKDGPMIIIAGAGSGKTRVLTYRIAHLMQQGVDSFNILSLTFT
NKAAREMKERIGSVVGYGEAKNLWMGTFHSVFARILRSEADKLGYPSNFTIYDTQDAVRL
ITAIIKEMRLDKDRYKPKQILSRISSFKNSLITVRAYFNNSDLQEADLQASRPKVGDIYK
EYVDRCFKSGAMDFDDLLLRTNELLARFPDVLAKYQDRFRYIMVDEYQDTNHSQYLIVRA
LADRFQNICVVGDDSQSIYSFRGANINNILNFQRDYSDAKTFKLEQNYRSTSNIVEAANS
VIDKNKVKLDKEVWTANDSGEKIKVMRSISDGEEGRFVAQSIWENQMNHQLTNNDFAILY
RTNAQSRAIEDALRKKDIKYKIYGGISFYQRKEIKDLLSYLRMLINPNDEEALKRIINYP
ARGIGATTVDKLTIAANHYNKSIFDIIKHLDKVDIKLNSSTKNKLENFKVMIQRFQVEAQ
TKNAFEVADLVVKQTQLVRDLQKDGTPEGINKVENVQELLNGIKDFITDKIETGEDASLT
AFLEDVALATDFDSEKDDTPRVSLMTIHLSKGLEYPYVYIVGLEENLFPSAMSMNTRNEL
EEERRLFYVALTRAEKVAYLTYAQTRYRWGKLTDGEPSRFLEEIDDQFLEYLAPKVPESS
VNRFVDASMFEDDSPSKFRFQKPIQKKRKEFLSKKDKGTTLPTKGRLKKVSEASTNNTNL
FDGEIVVGNVVEHNRFGKGKVLSLEGKGPNKKAEIEFGTIGKKKLLLQFAKLKVIG
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
ttggatacttatttagagcaacttaacgaaccacaaagagcggctgttttacaaaaagat
ggaccgatgattattatagcaggagcaggatcagggaaaacaagagtgttgacctataga
attgctcatttaatgcagcaaggggtcgattcatttaatattttatcattaacatttacc
aataaagcggcacgtgaaatgaaagaacgtattggaagtgttgtaggttatggtgaagca
aaaaacttatggatgggaacatttcattctgtttttgctaggattttaaggtcagaagca
gataagttggggtatccatctaactttacaatttatgatacgcaagatgctgtccgttta
attacagctattataaaagaaatgcgtttagataaagataggtacaaaccgaaacaaatt
ttaagtagaatatcctcttttaaaaatagtttaattactgttagagcttactttaataat
tcagatttacaagaagcagacctacaagccagtcgtccaaaagtaggggatatttataaa
gaatatgtggatagatgtttcaaatctggcgcaatggattttgatgatttattgttgaga
acaaatgagttgttagctcgttttccagatgtattagcaaaatatcaagatcgatttagg
tacataatggtagatgagtatcaagataccaaccattcacagtatttaatagtgagagca
ttagctgatagatttcaaaatatttgtgtggttggtgatgattctcaaagtatttatagt
ttccgtggagctaatattaataatattttaaattttcaacgagattattcagatgcgaaa
acatttaagcttgagcaaaattatagatcaacttctaatatcgtagaggctgctaatagt
gttattgataagaataaagttaaattagataaagaggtatggacagctaatgattctgga
gagaagattaaggtaatgcgttctatttctgatggagaagaaggaaggtttgtagcacaa
tctatttgggaaaaccaaatgaatcatcagttaacgaataatgattttgccattttatat
aggactaatgcacaatctagggctatagaagatgcattgcgtaaaaaagatataaagtat
aaaatttatggggggatttctttttatcaacgtaaagagataaaagatttactttcttat
ttaagaatgttaatcaatccaaatgatgaagaagctttaaaaaggattataaactatcca
gcaagaggaattggagcaactacagttgataaattgacgattgctgctaatcattataat
aaatcaatttttgatattattaagcatctggataaggttgatattaaattgaattcatct
actaaaaacaagttagaaaactttaaggtgatgattcaaagatttcaagtagaagcgcaa
accaagaatgcttttgaagtagccgatttagtagtgaaacaaacacaattggtaagagat
ttacaaaaagatggaacgcctgaagggataaataaagtagagaatgttcaagaattattg
aacggtattaaagattttattacagataaaatagaaacaggagaagatgcatccttaaca
gcatttttagaagatgtagctttggctaccgattttgatagtgaaaaagatgatacacca
agagtatctttaatgacgattcatttatcaaaaggattggaatatccatacgtttatatt
gttggcttggaagaaaatttatttccttcagctatgagtatgaatacacgaaatgaatta
gaagaggaacgtagactgttttatgtggccttaacaagggctgaaaaagttgcctattta
acctatgcacagacaagatataggtgggggaagttaactgatggagaaccaagtcgcttt
cttgaagaaatagatgatcaattccttgaatatttagcaccaaaagttcctgaatcatct
gttaataggtttgttgatgctagtatgtttgaagatgattcaccatctaagtttcgtttt
caaaaacctatacaaaagaaaagaaaagaatttctatctaaaaaggataaaggaactacg
ttaccaactaaaggaaggttaaaaaaagtgtcagaagcatctactaataatacaaatctt
tttgatggagaaatagtggtaggtaatgtagtagaacataatcgttttggtaaaggtaaa
gtgttgtctttagaagggaaagggccaaataaaaaagcagaaatagaatttggaacaata
ggtaaaaagaagttattgttgcaatttgcgaaactcaaagttatcgggtaa
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