Tenacibaculum vairaonense: T19A02B_4276
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Entry
T19A02B_4276 CDS
T11462
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tvai Tenacibaculum vairaonense
Pathway
tvai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tvai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
T19A02B_4276 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvai03400
]
T19A02B_4276 (ung)
Enzymes [BR:
tvai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
T19A02B_4276 (ung)
DNA repair and recombination proteins [BR:
tvai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
T19A02B_4276 (ung)
Prokaryotic type
T19A02B_4276 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
URO-D
Motif
Other DBs
NCBI-ProteinID:
CAL2095964
LinkDB
All DBs
Position
T190524A02B:5029218..5029883
Genome browser
AA seq
221 aa
AA seq
DB search
MQVKIADSWKNVLQEEFEKPYFKELINFVKSEYVSTTCYPKGSDIFAAFDNCAFEEVKVV
ILGQDPYHGAGQANGLCFSVHDGIAHPPSLINIFKEIESDLEIPYPKSGDLSKWAAQGVL
LLNATLTVRAGQAGSHQKKGWEEFTDAVIDEISKNREDIVFLLWGGYAKKKGAKIDKKKH
HVLTSGHPSPLSANRGYWFGNKHFSKTNVFLQEKQLPTIQW
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaaaaatagccgatagttggaaaaatgttttgcaagaagagtttgaaaagcca
tattttaaagaacttatcaattttgtgaaatcagaatatgtatcaacaacatgttatccc
aaaggttcagatatatttgctgcttttgataattgtgcttttgaagaggtaaaagtggta
attttaggacaagatccatatcatggagctggacaagcaaatggtttgtgtttttcggta
catgatggtattgcacatccgccatcattaattaatatttttaaagaaattgaaagtgat
ttagaaattccttatccaaaatctggtgacttatctaagtgggcagcacaaggtgtactt
ttattaaatgcaacgctaactgtaagagcgggacaagctggaagccatcaaaagaaagga
tgggaggagtttacagatgctgttattgatgagatttctaaaaatagagaagatattgtt
ttccttttatggggagggtacgctaaaaagaaaggcgcaaaaatagataagaaaaaacac
catgttttaacttcaggacacccatcacctttaagtgccaatagaggctattggtttgga
aataaacatttctcgaaaacaaatgtgtttttacaagaaaaacagttacctactatacaa
tggtag
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