Tachysurus vachellii: 132837465
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Entry
132837465 CDS
T09596
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
tvc
Tachysurus vachellii
Pathway
tvc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132837465 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132837465 (exosc7)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
132837465 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
132837465 (exosc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
132837465
NCBI-ProteinID:
XP_060713125
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All DBs
Position
21:2021515..2026040
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AA seq
291 aa
AA seq
DB search
MATIQVSEAEKVYIMHGVRDDLRVDGRGCEDYRHMEIETDVVSNTDGSAKVRLGQTDILV
GVKAEIGRPRPMVPDEGYLEFFVDCSANATPEFEGRGGEELGVELSNTLYKVFNNRHSVD
LRSLCICPGEHCWVLYVDVLLLQCDGNLFDTMSIAIKAALFNTRIPRVHISEGEEGGKEI
ELSDDPYDCMRLSVEHVPCIVTLSKIGHRHVVDATLQEKACSVASVLISVTHTGTVTCVR
KLGGGSLDPDSIFEMTETGKRVGKMLHVPLMELLQKEESLGKERTKVGFLA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcgactatacaagtcagtgaagcagagaaagtgtatatcatgcatggcgttcgggat
gatttaagagtggatggtcgtggatgtgaggactacagacacatggagattgaaacagac
gtggtgtccaatacagatggatctgctaaagtcagactgggacagacagacatccttgtg
ggagtaaaagctgagatcggcaggccgaggcccatggtgccagacgagggttatctggag
ttctttgttgactgctcggcgaacgccacgccggagtttgagggccgtggaggtgaggag
ctgggagtggagttgagcaacactctgtataaggtctttaataacagacacagtgtggac
ctgcgcagtctctgcatctgccccggagaacactgctgggttctgtacgtcgacgtgctg
ctccttcagtgtgatggaaacctgtttgacaccatgtccatcgccataaaagcagctctt
tttaacacacgcattcccagagttcacatatcggagggtgaggaaggagggaaggagatt
gagttgtctgatgacccatatgactgcatgcgtctcagcgtggaacacgtcccctgcatt
gtgaccttgagcaagatcggacacaggcacgtagtggacgcgaccctgcaggagaaagcc
tgctcagtagccagtgtattgatttcagtcacacacacaggaacagtgacgtgtgtacgg
aagcttggaggaggaagtctggacccagacagtatatttgaaatgacagagacaggaaag
cgagtggggaagatgcttcacgtacctctgatggagctgctgcaaaaagaagagagtctt
ggaaaagagagaacaaaagttggtttcctggcatag
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