Tachysurus vachellii: 132837512
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Entry
132837512 CDS
T09596
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
tvc
Tachysurus vachellii
Pathway
tvc03013
Nucleocytoplasmic transport
tvc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132837512 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132837512 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132837512 (nup153)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132837512 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
132837512
NCBI-ProteinID:
XP_060713200
LinkDB
All DBs
Position
21:6546115..6563865
Genome browser
AA seq
1512 aa
AA seq
DB search
MAATGGGKIRTRRYHIVSKPYGKAKQQPGLISRVTDTVKSIVPSWLQKYFNNGEVAEGGE
THVQVEQNNVPTPPNGNQEPAPLPDGRDSPEPSTSYAEPSTSRASLNFQDVLSRPPLNRS
HLHFPSHDGSPALGGPLFSQPSTSTAPFPASPFAVSSSFSLVKEIKDSSSQHEDDNISTT
SGFSSRASDKDVPTSKTAPLLWSPEMDRTHTGSQSAHAGLKRPAFNLSVFGTSSSSVMNS
SVLNSTQLGDSPFYPGKTTYGGASAAKTARSRPGTPYQAPVRRQIKAKPAGAQPCGVTSA
TARRILQSLERMSSPLADAKRIPSAVSSPLSASMNRTDLDVHFQSKRKKLEPAVPPVQKL
VIPAAAAVSGNRSVSFRPSLTPGSVSRMVEKGSKETPVRRSPHIPDAIPAATPSTSSLSY
PLSSTPAISITGAGGGKMKRERSIRPSTKRPDDEVAEVPNLPAVSLPISNFKLPTFSFSS
PPPSSTLTPSTRAMPLVSEQAANSKGTNAVSTPVSFTFSSPIVKATAGSPMSFSPSSEFT
FSAPTMKTATSMSNGKLAPAVSALKTTSEHSEEFDGPFKPAKTLKQGSVLDILKGPGFAS
PAQTSSETEPTKSTRSTSVHTPLTSLSGFGEKFKPAAGSWNCGTCLVQNKSSDKKCVACQ
APQPSTDSSSRSDSKPVKAPAASHSSLFAPPAGSWECDTCLVQNKPEVVKCVACETSRPG
TGVKPALTRPPVSEVSLTPTASSTPSTTSTTTTTSGLSLADKFKKPEGAWDCDVCMVQNK
AQDAKCVACQSAKPGASAVPSFQAPSSLPPASTPASSAPLLGFGDQFKKPEGSWECDVCC
VQNKAEDQQCVACQSTKPGAKVETKGIGPQTSSTNSTSSAFKFGSSNSSSAELKFGGTFS
NSTSTMSFKFGNAPSDSAASSVGFKFGGASTERTSTGASSTESFKFGGSSDGFKFGAAST
SESTSEEKKSESQNSASGFKFGGNGASVGSGFKFGAASTSESTSEEKKSESQNSASGLKF
GGSGANVGSGFKFGAASTSESTSEEKKSESQNSTAGFKFGGSSISTATTTASGGFAFGLS
KPEDKTGSSLSFSLSAPKAKGEKEDPLPSTEAVSATANAVPIFGKPPLAEANTAVLFGEE
TPQKTSTTTFMFGKPEEKNDTSTPSTGFLFTGAKEADKPAPSGFSFSKPDPPKELPKPSF
AFGKPAEATETTKPAFGFGQNATDNTAPKPTFAFMGSSAATPASNSLAPSLFGTPSSSSQ
APNPAPNSNFVFGQSSSSDAPSKSFMFGQQQQETQPASAEPSAGPNPVPTFVFGSVSNSN
ASPFSFGGAASTPASTAPAPSAAPAPFGFTATTSTSGFGSGQTPAFGSSQSTVPAFGSAA
SSFTATASAPPAFGVKPSAPSVFGQQPNSTPAFGSSTASSGQGAFQFGGATAFGVTGSNN
SNVFTFGGGSGGTAGPAASPAMPAQPAAPAGGFGFSQSPAFNIGSAKSSSPAPVGQHGIA
GRKIKTAVRRRK
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacaggaggagggaaaatcagaacgagacgatatcacatcgtgtctaaacct
tacggcaaggctaaacagcagcctggactgatcagtcgagtaacagacaccgtgaagagc
atagtcccctcttggctgcagaagtacttcaataatggagaggtagctgaaggaggagag
acccatgtgcaagttgagcagaacaacgtacctactcctcccaatggcaatcaggaacct
gcgccgctccccgatggacgcgactccccagaacccagcaccagttatgcagaaccctct
acaagccgagcgtctttgaacttccaggacgttctctccagacctccgctcaaccgctcc
caccttcatttcccttctcacgatggatccccagcactcgggggccctctcttctcccaa
ccttccacatctacagctccctttcctgcaagcccctttgccgtaagctcgagcttctct
ctagtgaaggagatcaaggactctagctctcagcacgaggacgacaatatctccaccacg
agtggcttttcatcaagagcgtctgataaagatgtacccacgtcaaagacggcaccactc
ctctggtcccccgagatggatcgcacacataccggatcacagtcggctcatgctggtctc
aagagaccagctttcaatctgtcagtctttggcacttcctcatcatcggtgatgaacagt
tcagtgctgaactccactcagctgggagattctcccttctatccagggaagacaacctat
ggcggcgcttcagctgccaagactgctcgttcacggccgggcacaccttatcaggctcct
gtgaggagacagatcaaggccaaaccggcaggagctcagccgtgcggagtgaccagtgcc
acagccagacgcatcctgcagtcactagagcgcatgtctagccctcttgctgatgcgaaa
agaattccatcagcagtttcctctcctttatcagcatcaatgaatcgcacagatctagat
gttcatttccagtctaagaggaaaaagctggaaccggctgtcccgcctgtgcagaaactg
gtgatcccagctgctgcagctgtgtctggtaaccgctccgtgtctttccgcccttcgcta
actcctggatctgttagcagaatggtggaaaagggcagcaaggagacgcctgttcgacgg
tcccctcatatcccagatgcaattccagctgccacaccaagcacaagcagcctgtcgtac
ccgttgtccagtacacctgctatcagcatcacgggtgccggtggcggcaagatgaagcga
gaaaggagcatccgcccttccaccaaaagacctgatgatgaggttgctgaagtgccgaat
ctgcctgctgtctctctgccgatcagtaacttcaagctgcctactttcagtttctcatcc
ccacccccttcatcgaccctcaccccaagcaccagggcaatgccactggtctctgagcaa
gcagccaacagcaaggggacaaatgctgtgtctacacccgtttcttttaccttttcttca
cccattgtcaaggcaacagctggcagtccaatgtccttttctccatcatctgaatttacc
ttcagcgcacctactatgaaaactgcaacttccatgtcaaatggcaaacttgctccagca
gtatctgcattaaaaacaaccagcgaacatagcgaggagtttgatgggcctttcaaaccc
gcgaagactttgaagcagggtagtgttctggatatccttaaaggacccggttttgcttct
ccagcccagacctcctctgaaacagaacccacaaagtcgacacgcagcacatctgtacat
acacccttgacttctctctctgggttcggagagaagtttaaacctgcagcaggatcatgg
aactgtggcacctgtctggtgcaaaacaaatcctcagacaaaaagtgtgtggcctgccag
gctccacagcccagcacagactcttcatccaggtcggacagtaaacctgtgaaagcccct
gctgctagtcatagttctttgtttgccccgccagctggaagctgggaatgtgacacgtgt
ctggtgcagaacaagcctgaggtggttaaatgtgtagcgtgtgaaacatccaggccagga
actggagtaaagcctgccctgactcggcctcctgtctctgaggtctccttaacacctact
gcttcttctaccccatccaccacttccacaaccaccactacatctggactaagtcttgct
gacaagtttaagaagcccgagggggcatgggattgcgatgtatgcatggttcaaaataaa
gcacaggatgctaagtgtgtagcgtgtcagagcgctaaaccaggagcatcagcagtacct
tcattccaagcaccttcatccctgcctcctgcatctacaccagcaagtagtgctcctctt
ttgggatttggtgaccagttcaagaaacctgagggcagttgggagtgtgatgtctgctgt
gttcaaaacaaggctgaggaccagcagtgtgtggcctgccaatcaaccaaaccgggagct
aaagtagaaaccaaaggtattggccctcagacatccagcactaattcaacctcaagtgca
ttcaaatttggttcctcaaattcaagctctgctgagttgaaatttggtggcactttttca
aactccacctccacaatgtcctttaagtttggcaatgctccttcagactctgctgcctct
tctgtaggcttcaaattcggaggtgcttccacagaacgcacctcaacaggcgccagttca
accgagagtttcaagtttggtggctcatcagatggctttaaatttggagcagcctccact
tctgaatcaacgagtgaagagaaaaagagcgaatctcaaaattctgcatctggttttaag
ttcggcggaaacggtgcaagtgttggctctggctttaaatttggagcagcctccacttct
gaatcaacaagtgaagagaaaaagagcgaatctcaaaattccgcatctggtttgaaattt
ggaggaagcggtgcaaatgttggctctggctttaaatttggagcagcctccacctctgaa
tcaacaagtgaagagaaaaagagtgagtctcaaaattctactgctggttttaaatttgga
ggaagctctataagcactgctactacaactgcatcagggggctttgcatttgggctctca
aaacctgaagacaaaacagggtccagtctgtcgttcagtttgtcagcacctaaagccaaa
ggtgaaaaggaagaccctcttccatccacagaagctgtttcagccactgccaacgctgtt
cctatttttggcaagccgccgttggcagaggctaacacagctgtactgtttggagaagaa
accccacagaagacttcaaccactactttcatgtttggtaaaccagaggagaaaaacgat
acctcgacgccttcaactggctttctgttcactggtgccaaggaggctgacaaacctgca
ccctctggcttcagcttcagcaagccagaccctcctaaggagctccccaaaccttcattt
gcatttggaaaacctgctgaggccacagaaaccacaaagccagcatttggctttggacag
aatgccacagacaatacagcaccaaagcctacgttcgcttttatgggtagttcagccgcc
acccctgcctccaatagtcttgcacccagcctctttgggactcccagcagttcgagccaa
gcccccaaccctgctccaaacagcaactttgtttttggccagagttcctcttcagatgca
ccttccaagagctttatgtttgggcagcagcagcaagaaacccaaccagcttcagcagaa
ccctctgccggtcctaatccagtaccaacttttgtctttggctctgtgagcaattcaaac
gcatcaccgttctccttcggcggtgcagcttctacacccgcgtctacagctcctgcacct
tcggcagctccagctccatttgggtttactgccaccacttccacctctggctttggctct
ggacagaccccagcgtttggctcttcacagtccactgttccagcttttggctcagctgca
tcctctttcacagccacagcatcagcccctcctgcctttggagttaagcctagcgctcct
tccgtgttcggccagcagcccaactcaacacctgcttttgggtcatctactgcctcttct
ggacaaggagccttccagtttgggggagccacagcttttggggtgactggtagcaacaac
agcaatgtgtttacatttggaggagggtccggaggtacagccggtcctgcagcatctcca
gccatgcctgcacagccagcagcacctgcaggaggctttggcttctcacagtccccggcc
ttcaatatcgggtcagctaagagttccagcccggcaccggttggacagcatggcatcgcc
ggccgaaagatcaaaactgctgtccggcgtaggaagtaa
DBGET
integrated database retrieval system
