Tachysurus vachellii: 132837543
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Entry
132837543 CDS
T09596
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
tvc
Tachysurus vachellii
Pathway
tvc04145
Phagosome
tvc04814
Motor proteins
tvc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132837543
09142 Cell motility
04814 Motor proteins
132837543
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132837543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132837543
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tvc04812
]
132837543
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
132837543
Cytoskeleton proteins [BR:
tvc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
132837543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Dynein_IC2
WDR55
Beta-prop_EML
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
132837543
NCBI-ProteinID:
XP_060713246
LinkDB
All DBs
Position
21:11084503..11135407
Genome browser
AA seq
628 aa
AA seq
DB search
MADKSDLKAELERKKQRLAQIREEKKRKEEEKKKKESETQQKIEAAPEDSDLDRKRRETE
ALLQSIGISPEPPLVPAQMSPSKSMSTPSETGSQDSVEGTTVGRTLQWDTDPSVLQLQAD
SELGRRLHRLGASKIIQVDFLPKEVVSYSKETQTPVAAHQSEEDEEEDEDNTEPKSGLES
DQKEDEENKDAKEGHPRELTEEEKQQVLHSEEFVIFFDRSIRVMERALAEDSNIFFDYSG
RDLEDKEGDLQGGSILSFNRLFYDEHWSKHRVITCLDWSPQYPELLVASYNNNEDAPHEP
DGVALVWNMKFKKTTPEYIYHCQSPVVSVGFARFHPNLLVGGTYSGQIVLWDNRSHRRTP
VQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGRMCSWSLDMLSQPQESMELVYNKS
KPVAVTGMAFPAGDVNNFVVGSEEGTVYTASRHGSKAGICEMFEGHQGPVTGISCHSAVG
PVDFSHLFVTSSFDWTVKLWSTKQNKPLYSFEDNADYVYDVMWSPVHPALFAAVDGMGRL
DLWNLNNDTEVPTASVTIEGAPALNRVRWASGGKELAVGDSEGRLWIYDVGELASAHSED
WTRFARTLVEIRANRADGEEEGPVELPS
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagtgacctaaaggctgagctggagcgcaagaagcagcgtctggctcaa
atcagggaggagaaaaaaagaaaagaggaagagaaaaagaaaaaagagtcagaaacacag
cagaagattgaagctgctcctgaggactcagatttggaccgtaaacgcagagagactgag
gcactgctccagagtattggaatctcccctgagccaccgttagtcccggcacaaatgtct
ccatcaaaatcgatgagcactccgagtgagacaggaagtcaggactctgtggaagggaca
actgtgggaaggaccctgcagtgggacactgacccctctgttctccagctgcaggctgat
tctgagctcgggcgcaggctgcacagattgggggcgtccaagataatccaggtggatttt
ttacccaaagaggtggtttcctactcaaaagagacacagactcctgtagcagcacatcag
tcagaagaggatgaagaggaggatgaagataatacagagcccaaatcaggcctggagtca
gaccagaaggaggatgaggagaataaggatgcaaaagaaggccacccgcgggagctgacg
gaggaggagaagcagcaggtcctgcactctgaggagtttgtgatcttctttgaccgcagt
attcgtgtgatggagcgagctcttgctgaagattccaacatcttttttgattacagtggc
cgagacctcgaggataaagaaggggacctgcagggagggtcaattctgtcctttaatcgt
ctgttctatgatgagcactggtctaagcaccgggtcatcacctgtctggactggtctcct
cagtacccagagctgcttgtggcttcttataacaacaacgaggatgctcctcatgagcca
gatggtgtggctttagtgtggaatatgaaattcaaaaagaccacgcctgagtacatctac
cactgccagtctcctgtggtgtccgtgggctttgctcgtttccatcctaatctgctggtg
ggtggcacgtactcagggcaaattgtcctctgggacaaccgcagccataggagaacccca
gtccagagaacgccactctctgcagctgcacatactcatccagtgtactgcgtgaatgtg
gtgggaacccagaatgccaacaacttgatcacggtgtccacagatggccggatgtgctcc
tggagcctggatatgctctcccagccacaggagagcatggagctggtctacaataagtca
aaaccagtagctgtgactggaatggcctttcctgctggagatgtcaataactttgtggtg
ggcagcgaagaggggactgtgtacacggcttctagacatggcagtaaagctggtatctgt
gagatgttcgagggccatcagggaccagtgactggcatcagctgtcatagtgctgtgggc
ccagtagacttctcccacctcttcgtcacctcgtcttttgactggactgtcaaactctgg
agcacgaagcaaaacaagccgctgtactcctttgaggacaatgctgactatgtgtacgat
gtcatgtggtctccagtgcatcccgcactattcgctgcagtggacggaatgggccgtctc
gatctgtggaacctaaacaatgacaccgaggtacccacagctagcgtgaccatcgagggt
gctcctgcgctcaaccgggtgcgttgggcttcaggagggaaggagctggctgtaggagac
tcagagggtcggctctggatctacgatgttggagagctggcatcagcacacagcgaggac
tggactcgcttcgcccgtacgctggtggagatccgtgccaaccgagctgacggtgaggag
gaaggccctgtggaattgccatcgtag
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integrated database retrieval system
