Tachysurus vachellii: 132837743
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Entry
132837743 CDS
T09596
Symbol
rbm39a
Name
(RefSeq) RNA-binding protein 39a isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvc03041
]
132837743 (rbm39a)
Spliceosome [BR:
tvc03041
]
Common components
Common spliceosomal components
General mRNP proteins
132837743 (rbm39a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
PRP38_assoc
RRM_occluded
RRM_5
RBD_DEAH11
RSRP
RRM_7
Motif
Other DBs
NCBI-GeneID:
132837743
NCBI-ProteinID:
XP_060713531
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Position
22:complement(11749810..11757089)
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AA seq
529 aa
AA seq
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MADDFDIEAMLEAPYKKDETKSISSNGHEERSKKKKKSRSRSRSRERKRSKSRDRKRSKS
RDRSRERKRSRSRDRRRSRSRERKRSRSRSRERAGRFRTAFSGLKFNGGSRGKTGPLPVI
KLSRKKSRSRSPFKRDKSPIRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGK
VRDVRMISDRNSRRSKGIAYIEFVEATSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAAM
ANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITF
ADAECAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDNDELERTGIDLGTTGRLQ
LMARLAEGTGLQIPPAAQQALQMSNSMVAMAAATAAMNPGLSFNINVPTNQPLNLPSQPI
ATHCFQLSNMFDPNSENELGWDIEIQDDVIEECNKHGGVIHIYVDKKSTEGNVYVKCPSI
PAAMAAVSALHGRWFGGKMIKAAYVPLPTYHNLFPESVQATQLLMPTRR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgactttgacatcgaagccatgcttgaggcgccttataaaaaggatgagacg
aagtccataagttccaatggccatgaagaacggagcaagaagaaaaagaagagcagaagt
cgtagtaggagcagggagagaaagagaagcaagagccgggaccgcaaaagaagcaagagc
cgggacaggagtcgtgaacgaaagagaagccgaagccgcgacaggagacgcagtcggagc
agagagaggaagcgcagccgttccaggagcagggagcgtgcaggtcgcttcagaacagcc
ttttctggcctgaaatttaatggtggttccagggggaagactggcccactgcctgtcatc
aaactaagccggaaaaagtctaggagccgcagcccattcaaacgggacaaaagtcctatc
agacaacctatagataatctcacaccagaggagagggatgcccgcacagtcttttgcatg
caacttgctgccagaattcggccccgggacctagaggaattcttttctgctgtggggaaa
gtgagggatgtgaggatgatctctgacagaaactccagaaggtccaagggaattgcctac
attgaatttgtggaagccacctctgtaccactagcaataggtctgtctgggcaaaggctg
cttggagtaccaatcattgttcaggcttcacaggctgaaaagaacagagctgctgcaatg
gccaacaacttgcaaaaaggtagtgctgggcctatgaggctgtatgttggctcgctacat
ttcaacatcacagaagacatgctcagagggatctttgaaccctttggaaggattgatagt
attcagcttatgatggatagcgaaacagggagatccaagggatatggctttatcactttt
gctgatgctgagtgtgctaagaaagccttggaacagctaaatggctttgaactggctggc
aggccaatgaaagtgggtcatgtaactgagcgcactgatgcatctacagccagctctttc
ttggataacgatgaacttgaaaggactggcattgacctgggcaccactgggaggctgcag
ctaatggccaggctggctgaagggactggactgcagatcccccccgctgctcagcaggct
cttcagatgagcaactcaatggtggcaatggcagcagctacggcggcaatgaatccagga
ttgagttttaatatcaacgttcccacaaatcaacctctcaatctaccttctcagccgatt
gccacccactgcttccagctgtccaacatgtttgatccaaattcggaaaatgaacttgga
tgggatattgaaatccaagatgatgtaattgaagaatgtaacaaacatggaggagtgatt
catatatatgtggacaagaaatctactgagggaaatgtatatgtgaagtgcccaagcatc
cccgctgcaatggctgctgtcagtgcattacatggacgctggtttggaggtaaaatgatc
aaagcagcatacgtccctctgccaacataccacaatcttttcccagagtcagtgcaagct
acacaacttcttatgccgactcgccggtga
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