KEGG   Tachysurus vachellii: 132837875
Entry
132837875         CDS       T09596                                 
Symbol
kdm5ba
Name
(RefSeq) lysine (K)-specific demethylase 5Ba isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
tvc  Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tvc01009]
    132837875 (kdm5ba)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tvc03036]
    132837875 (kdm5ba)
Enzymes [BR:tvc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     132837875 (kdm5ba)
Protein phosphatases and associated proteins [BR:tvc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     132837875 (kdm5ba)
Chromosome and associated proteins [BR:tvc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    132837875 (kdm5ba)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD PHDvar_NSD PHD_4
Other DBs
NCBI-GeneID: 132837875
NCBI-ProteinID: XP_060713799
LinkDB
Position
22:complement(11631842..11667493)
AA seq 1450 aa
MTQSRPNEFIPPPECPVFEPSWEEFDDPFAFISKIRPIAERTGVCKIRPPQGWQPPFACD
VDQLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCSLKIPLVERKSLDLYQLYTLV
VEEGSFDVVCRERKWTQIALKMGFAPGKAVGSHLRAHYERILYPYYLFKIGANLLSSQKP
TLTNDTKDKVYKSHDLPQRQSVKPSEISSIARRAKRSKITLKGRCFKHEQEEELNIRPNL
RRRMGSYVAKLEAVHVKQEPMEQDESLPNGEKTKVEQYMCLVCGGGGDEDKLLLCDGCDD
SYHIFCLIPPLHDVPKGDWRCPKCLAQECGKPQVAFGFEQAPRDYTLRSFGDMADSFKSD
YFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKDFGSGFPVRNGNYKVLSDDE
HYLSCGWNLNNMPVLDASVLTHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLH
WGEPKTWYGVPGFAAEQLEAVMKKLAPELFESQPDLLHQLVTIMNPNVLMKHGVPIYRTN
QCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWIPLGRQCVEHYRSLNRYCVFSHDEM
VCNVAAKADSLELEMASAIQRDMSIMIEEEKELREKAYKLGVWHSQQVDYEEQPDEERQC
SKCRTTCYLSAITCPCSPGQLVCLHHLQDLCSCNPNRYTLNYKYTVGMLNQMFKTLAARA
ETYSDWASKVNMILYADQDNKSDLEELRALIVEAEKMMYPEMDLLLHLRQTVQGAEKSAL
MAQRLLNGKRQTRYRSGGGKSQKHLTVEELRLFVQQLYDLPCTIRQAPFLKALLCRVRQF
QDQSSHILAIEMPSSSALQAVLDEGSGLEVELPELDVLRQRLEQARWVEAVQQASKEPTS
LSLERMRKLIDQGVGLEPHTCVEKTMANLQELLTVCEHCEEKAQSMLMARPRQNLEMLEA
LLLEVNSIQAYLPNCLQLQDSVIRAREWIQEAEALQLSGRIPVLSSLNDLILRAKGIPVL
LSPLARLESLVSEVQAWKESAVKVFLLKYSSVSLLEVLCPRCETRCQKSKSKRVRDVPPA
DKKNGIKLSCLGDVERALSESKETALAMATLCEVRLKELEYLNILRTTNNAKFLPSNSLA
PTVCLCHTVPAGPMLQCELCHDAYHIGCVPGYQDTQAGQPWLCPLCSRSEKPPLDKVLPL
LASLQRIRVRLPEGDALRFMIERTVHWQHRVQQISPLTQQCNEKMETFSGKTSPFLDGRT
GCFYMQHSCIPLSVLRPELEELLVEGLLLQVTLPELQHLYQGFFPSQHALQSSEHDHQYH
IAQDSSMIYKTPPQGKIQSLELQNVSETIEKNPKRHLEKENADEQYRGAVKKPKNKKSRI
NRERTHEKITTSSSGLSLDPSFSEESEEDWSMCSAKQCQQPEGYEEIGDLLTWGWAKSQD
LQLSGKLGSV
NT seq 4353 nt   +upstreamnt  +downstreamnt
atgacccaatctcgacccaacgagtttattccaccgcctgaatgtcctgtgtttgagcct
agttgggaagaattcgacgacccgtttgcttttatcagcaaaatacgtcccattgcagaa
aggactggtgtttgtaagatcagaccgcctcaggggtggcagccaccatttgcctgtgat
gtggaccaattacatttcaccccacgcatacagaggctcaatgaattggaggctcaaacc
agagttaagctcaactttctggaccagatagccaagttttgggaactacagggctgctcg
ttgaaaatccctcttgtggagcgtaaatcacttgacctgtaccagctctatacgttggtg
gtggaggagggaagctttgatgtggtatgcagggaacggaaatggactcagatagcactg
aagatgggttttgctcctggcaaggctgttggatctcacttacgtgcccactatgagagg
attctctacccttactacctcttcaagataggggccaaccttctgagctcacagaaaccc
acccttacaaatgataccaaagataaggtctataaatctcatgacttgccccaacgacag
tctgtaaagccttcagaaatctcctccattgctcgtagagccaaacgttctaaaatcact
ttaaagggtcgctgttttaaacacgaacaggaggaagagttaaatatcagacccaacctg
agaaggagaatgggctcttatgtggcaaaactagaagcagtccatgtgaaacaggagcct
atggaacaagatgaatcactccccaatggagaaaaaacaaaggtggaacagtacatgtgt
ttggtgtgtgggggaggaggtgatgaggacaaactgttgttgtgtgatggctgtgatgac
agctaccacatattctgtcttatcccaccactccatgatgttcccaaaggggactggagg
tgtcccaagtgtctggcacaggagtgcggcaagcctcaggttgcgttcggctttgaacag
gctcccagagactacacactccgctcctttggagatatggcagactccttcaagtcagac
tatttcaacatgcctgttcatatggtccctaccgagctggttgagaaggaattttggcgt
ttagttagcaccattgaggaagatgtcacagtagagtatggggcagacattgcctcaaag
gactttggcagtggcttccctgtcagaaatggcaattataaagtcctgtcagatgatgag
cattacctcagctgtggctggaacctgaataacatgccagtgcttgatgcatctgtgctg
actcacatcacagctgacatatgtgggatgaaactgccttggctctatgtgggcatgtgc
ttctcctctttctgttggcatattgaggatcattggagttattctataaactatttacat
tggggagagccaaagacatggtatggtgttcctggctttgcagcagagcagttggaagca
gtgatgaaaaaacttgcccctgagctctttgagtctcaaccagatttgcttcatcagttg
gtcacaatcatgaaccccaatgtgctaatgaagcatggagtgcccatttaccgcacaaac
cagtgtgctggtgagtttgtcatcaccttccccagagcatatcacagcgggttcaatcag
ggctttaacttcgcagaggctgttaacttctgcacagtagactggataccacttggtcga
caatgtgtagagcattatcgctcattaaacagatactgtgttttctcccatgatgagatg
gtctgtaatgttgcagccaaggcagacagcttggagctggagatggcctctgccatacaa
agggatatgagcattatgattgaggaggagaaagagctgcgagaaaaagcatacaagctg
ggtgtttggcactcccagcaggtggactatgaagaacagccagatgaggagagacagtgt
tctaaatgcaggactacctgctacctatctgccatcacctgtccctgcagccctggccag
ctggtgtgtctacaccatctccaggacctctgctcctgtaaccctaaccgttatacgttg
aattataaatacacagtgggcatgttgaaccaaatgttcaagactttggcagcacgtgct
gagacatacagtgactgggcttctaaagttaacatgattttatatgctgaccaagacaat
aaaagtgacttggaggaacttcgtgcactgattgttgaggccgaaaaaatgatgtatcct
gagatggatttgctactccatttaagacagactgttcaaggtgcagaaaagagtgcctta
atggcccaacggctacttaatgggaaaagacagaccaggtatcgctcaggtggtgggaaa
tctcagaaacatctcactgtagaggagttgaggttatttgtacagcagctatatgacctg
ccctgcaccattagacaggccccttttctcaaggctctgctctgccgtgtgaggcagttc
caggatcagagctcgcatatcctggccatagagatgcctagctcttcagccctgcaagct
gtgctggatgagggctctgggctggaggtagagttgccagagcttgatgtgctcaggcag
cggctagaacaggcacgctgggttgaagcagtacaacaggccagcaaggagcctaccagc
ctcagcctagaacgaatgaggaaactgattgaccaaggagtgggtctggagcctcatacc
tgcgtagagaagactatggccaacctgcaagagctgctaactgtgtgtgagcactgcgag
gagaaggcacaaagcatgctaatggccagacctcgccaaaatttagagatgctggaggca
ctgctgctggaagtaaatagcatccaagcttatctgcccaactgtcttcaactgcaagac
tcagtaatcagggctagagagtggatacaggaggcagaagccctacagctcagtgggcgt
atccctgttctctcctctttgaatgatctgatcttgagagctaaaggcatcccagtcctg
ctgtcacctctggcacggctggaaagccttgtgtcagaggtgcaggcctggaaggagagt
gcagtaaaggtttttttgttgaagtactcctctgtctccctcctggaggtactctgccct
aggtgtgagacaaggtgtcagaaatcaaaatcaaaaagagtgagagatgttcctccagct
gataaaaaaaatggaataaaactgagctgtcttggtgatgtggaaagagcactgtctgaa
agcaaagagacagctttagcaatggccactctgtgtgaggtgcgtttgaaggagctggaa
tacctgaatatcctaaggaccacaaacaatgcaaagtttctgccgtctaacagcttggct
cctacagtgtgcctatgccatacagtgccagcagggcccatgctccagtgtgaactctgc
catgatgcttaccacattggttgtgtgccagggtaccaggatacacaggcagggcagcct
tggctgtgcccactctgcagccgatctgagaaacctcctctggacaaagtgctgccgctg
cttgcctctctccagcgtattcgagtacggctcccagagggtgatgcactgcggtttatg
attgagaggacagtgcactggcagcacagagtgcagcagatctcacctttgactcagcag
tgtaatgaaaaaatggaaactttttctggaaaaacgtctccattcttggatggtcgtact
gggtgcttctacatgcaacattcatgcattcctctcagtgttcttagacctgaactagag
gagctgcttgtggaaggactccttctacaagtgactttgcctgagctgcagcatctctat
caggggttctttccctctcagcatgcccttcagagcagcgagcatgaccaccaataccac
attgcacaggacagtagcatgatttacaaaactccaccccaagggaagatccagagttta
gagttgcaaaatgtcagtgagacaatagagaagaaccccaagaggcacttggaaaaggag
aatgctgatgagcagtacagaggtgctgttaagaagcccaagaataaaaagtctaggata
aaccgagagaggacacatgagaaaataaccacctcctcatctggtttgagcttagaccca
tcgttttcagaggaatctgaagaggactggtctatgtgctcggcaaagcaatgtcaacag
ccagagggatacgaggaaattggagatctactgacatggggatgggctaagtcccaggac
ctccaacttagtggtaaactgggttcagtgtga

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